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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0674 and Dsui_0675 are separated by 11 nucleotides
Dsui_0675 and Dsui_0676 are separated by 77 nucleotides
Dsui_0676 and Dsui_0677 overlap by 4 nucleotides
Dsui_0677 and Dsui_0678 are separated by 129 nucleotides
Dsui_0674: Dsui_0674 - cell division protein, at 673,639 to 674,295
_0674
Dsui_0675: Dsui_0675 - putative dithiol-disulfide isomerase involved in polyketide biosynthesis, at 674,307 to 674,966
_0675
Dsui_0676: Dsui_0676 - short-chain dehydrogenase of unknown substrate specificity, at 675,044 to 675,817
_0676
Dsui_0677: Dsui_0677 - hypothetical protein, at 675,814 to 676,635
_0677
Dsui_0678: Dsui_0678 - hypothetical protein, at 676,765 to 677,121
_0678
Group
Condition
Dsui
_0674
Dsui
_0675
Dsui
_0676
Dsui
_0677
Dsui
_0678
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-8.7
-0.2
-3.0
-0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-9.2
-0.0
-2.3
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-6.9
+0.2
-2.4
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-6.3
+0.1
-2.2
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-5.7
-0.4
-1.9
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-5.1
+0.1
-2.8
-0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-5.4
-0.0
-2.1
+0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
-4.1
-0.0
-2.9
+0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-4.7
-0.0
-2.1
-0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
-3.2
+0.1
-2.9
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
-4.2
+0.1
-1.8
+0.1
stress
ALP with Zinc 2 mM
N.D.
-3.1
-0.4
-0.5
-1.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-3.5
-0.4
-1.3
-0.0
stress
ALP with Cobalt chloride 0.25 mM
N.D.
-1.9
-0.1
-2.3
-0.9
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
-3.6
+0.2
-1.5
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-2.8
-0.7
-1.0
-0.2
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-2.5
+0.3
-1.0
-1.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-3.2
-0.4
-0.7
-0.0
stress
ALP with Zinc 1 mM
N.D.
-2.2
-0.5
-0.6
-1.0
stress
ALP with nitrate 75 mM
N.D.
-1.2
-0.4
-1.0
-1.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
-2.4
-0.7
-0.7
-0.0
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
-2.4
-0.4
-0.2
-0.8
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
-2.5
-0.3
-0.2
-0.6
stress
ALP with Fusidic 0.01 mg/ml
N.D.
-2.2
+0.2
-1.3
-0.4
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
-2.6
-0.2
-0.2
-0.6
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
-2.8
+0.5
-0.5
-0.3
stress
ALP with Fusidic 0.007 mg/ml
N.D.
-1.6
+0.2
-1.0
-0.8
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
-0.7
+0.4
-1.9
-0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
-2.1
+0.5
-0.6
+0.3
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
-1.4
-0.3
+1.6
-0.1
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