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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0662 and Dsui_0663 overlap by 8 nucleotides
Dsui_0663 and Dsui_0664 overlap by 14 nucleotides
Dsui_0664 and Dsui_0665 are separated by 78 nucleotides
Dsui_0665 and Dsui_0666 are separated by 145 nucleotides
Dsui_0662: Dsui_0662 - phosphomethylpyrimidine kinase, at 659,258 to 660,100
_0662
Dsui_0663: Dsui_0663 - thiamine-phosphate pyrophosphorylase, at 660,093 to 660,740
_0663
Dsui_0664: Dsui_0664 - glutamate-1-semialdehyde-2,1-aminomutase, at 660,727 to 662,010
_0664
Dsui_0665: Dsui_0665 - polyphosphate kinase 2, PA0141 family, at 662,089 to 663,288
_0665
Dsui_0666: Dsui_0666 - Na+/proline symporter, at 663,434 to 664,936
_0666
Group
Condition
Dsui
_0662
Dsui
_0663
Dsui
_0664
Dsui
_0665
Dsui
_0666
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.3
-1.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.5
-1.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.5
-1.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.4
-1.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.4
-1.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.3
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.4
-1.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
+0.0
-0.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.0
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.4
-1.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.3
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
-1.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
+0.2
-0.9
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.4
-1.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.6
-1.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.7
-1.2
carbon source
propionate (C)
N.D.
N.D.
N.D.
+0.2
-0.7
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
N.D.
-0.1
-0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
+0.3
-0.6
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
+0.5
-0.9
carbon source
propionate (C)
N.D.
N.D.
N.D.
+0.1
-0.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
+0.6
-0.3
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
+0.3
+0.2
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
N.D.
-0.1
+0.7
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
N.D.
+0.2
+0.6
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
N.D.
-0.1
+1.0
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
N.D.
+0.1
+0.9
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
N.D.
+0.0
+1.0
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
N.D.
+0.1
+1.3
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
N.D.
N.D.
+0.6
+1.8
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