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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0654 and Dsui_0655 are separated by 125 nucleotides
Dsui_0655 and Dsui_0656 are separated by 57 nucleotides
Dsui_0656 and Dsui_0657 are separated by 33 nucleotides
Dsui_0657 and Dsui_0658 are separated by 79 nucleotides
Dsui_0654: Dsui_0654 - hypothetical protein, at 647,870 to 648,325
_0654
Dsui_0655: Dsui_0655 - putative membrane protein, at 648,451 to 649,077
_0655
Dsui_0656: Dsui_0656 - chemotaxis protein histidine kinase-like protein, at 649,135 to 655,254
_0656
Dsui_0657: Dsui_0657 - methyl-accepting chemotaxis protein, at 655,288 to 657,486
_0657
Dsui_0658: Dsui_0658 - chemotaxis signal transduction protein, at 657,566 to 658,078
_0658
Group
Condition
Dsui
_0654
Dsui
_0655
Dsui
_0656
Dsui
_0657
Dsui
_0658
stress
ALP with Cisplatin 0.0007 mg/ml
-1.5
-1.6
-0.4
-0.4
+0.4
stress
ALP with Cisplatin 0.0008 mg/ml
-1.7
-0.5
-0.4
-0.5
+0.2
stress
ALP with Cobalt chloride 0.25 mM
-1.2
-1.2
+0.0
-0.4
+0.0
stress
ALP with Cobalt chloride 0.2 mM
-1.7
-0.7
+0.1
+0.0
-0.3
stress
ALP with Nickel (II) chloride 3.5 mM
-1.5
-0.4
-0.4
-0.3
+0.3
stress
ALP with Nickel (II) chloride 1.5 mM
-1.4
-0.7
-0.3
-0.2
+0.3
stress
ALP with Cisplatin 0.0009 mg/ml
-1.6
-0.2
-0.4
-0.7
+0.6
stress
ALP with nitrate 50 mM
-1.9
-0.2
-0.2
-0.4
+0.6
alp richb
ALP
-2.0
-0.6
+0.0
+0.3
+0.2
stress
ALP with Chloride 75 mM
-1.4
-0.5
-0.1
-0.5
+0.5
stress
ALP with nitrate 75 mM
-1.9
-0.0
-0.3
-0.5
+0.8
stress
ALP with perchlorate 3 mM
-1.6
-0.7
+0.2
+0.0
+0.3
stress
ALP with Nickel (II) chloride 2.5 mM
-0.9
-0.3
-0.5
-1.2
+1.0
stress
ALP with perchlorate 6 mM
-1.5
-0.8
+0.4
+0.3
+0.1
stress
ALP with sodium fluoride 40 mM
-1.9
-0.4
+0.1
+0.3
+0.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.5
-0.7
+0.2
+0.2
+0.3
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-2.0
-0.3
+0.2
+0.4
+0.4
carbon source
pyruvate (C)
-1.1
-1.3
+0.4
+0.5
+0.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-2.0
-0.4
+0.4
+0.7
+0.4
stress
ALP with nitrite 0.45 mM
-1.7
-0.2
+0.1
+0.3
+0.7
stress
ALP with perchlorate 12 mM
-1.5
-0.6
+0.5
+0.7
+0.2
carbon source
D-Lactate (C)
-1.0
-0.6
+0.5
+0.6
+0.4
carbon source
a-Ketoglutaric (C)
-0.8
-0.5
+0.7
+0.8
-0.1
carbon source
a-Ketoglutaric (C)
-0.6
-0.9
+0.6
+0.8
+0.3
carbon source
propionate (C)
-0.9
-0.5
+0.7
+0.9
+0.1
carbon source
propionate (C)
-0.8
-0.4
+0.8
+1.1
-0.1
stress
ALP with copper (II) chloride 0.6 mM
-0.5
-1.8
+1.3
+1.7
+0.3
stress
ALP with Fusidic 0.02 mg/ml
-1.5
-0.5
+3.2
+3.7
+0.9
stress
ALP with Fusidic 0.007 mg/ml
-1.6
-0.6
+3.8
+4.4
+1.2
stress
ALP with Fusidic 0.01 mg/ml
-1.2
+0.0
+3.6
+4.3
+1.2
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