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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0650 and Dsui_0651 are separated by 14 nucleotides
Dsui_0651 and Dsui_0652 are separated by 4 nucleotides
Dsui_0652 and Dsui_0653 are separated by 108 nucleotides
Dsui_0653 and Dsui_0654 are separated by 238 nucleotides
Dsui_0650: Dsui_0650 - hypothetical protein, at 643,600 to 644,280
_0650
Dsui_0651: Dsui_0651 - tyrosine recombinase XerC, at 644,295 to 645,200
_0651
Dsui_0652: Dsui_0652 - putative membrane protein, at 645,205 to 646,335
_0652
Dsui_0653: Dsui_0653 - putative SAM-dependent methyltransferase, at 646,444 to 647,631
_0653
Dsui_0654: Dsui_0654 - hypothetical protein, at 647,870 to 648,325
_0654
Group
Condition
Dsui
_0650
Dsui
_0651
Dsui
_0652
Dsui
_0653
Dsui
_0654
No stressor control+ 10 mM ClO4 and 20 mM lactate
-6.3
-0.9
+0.1
-0.0
-0.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.6
-1.0
-1.9
-2.0
-1.6
stress
ALP with Cisplatin 0.0008 mg/ml
-0.4
-1.2
-1.6
-2.0
-1.7
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-5.9
-0.7
+0.0
-0.1
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-6.0
-0.6
-0.0
-0.1
+0.1
stress
ALP with Zinc 2 mM
-0.9
-0.6
-1.6
-1.7
-1.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
-5.6
-0.8
+0.1
-0.0
+0.0
alp richb
ALP
-0.3
-0.4
-1.6
-1.9
-2.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.5
-0.7
+0.2
-0.1
-0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-5.4
-0.9
+0.1
-0.1
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.5
-0.7
+0.2
+0.0
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-5.3
-0.5
+0.0
+0.0
-0.1
stress
ALP with nitrite 0.45 mM
-0.4
+0.0
-1.6
-2.1
-1.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-5.2
-0.6
+0.2
+0.1
-0.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.6
-0.3
-0.8
-2.0
-2.0
stress
ALP with Chloride 75 mM
-0.3
-0.6
-1.2
-2.1
-1.4
stress
ALP with sodium fluoride 40 mM
-0.8
-0.2
-0.8
-1.9
-1.9
stress
ALP with nitrite 0.15 mM
-0.5
+0.2
-1.3
-2.0
-1.9
stress
ALP with Nickel (II) chloride 1.5 mM
-1.0
-0.5
-1.2
-1.5
-1.4
stress
ALP with Cobalt chloride 0.25 mM
-0.6
-0.5
-1.3
-1.9
-1.2
stress
ALP with sodium fluoride 30 mM
-0.4
-0.3
-1.1
-1.9
-1.7
stress
ALP with nitrite 0.3 mM
-0.7
-0.3
-0.9
-1.6
-1.9
stress
ALP with perchlorate 3 mM
-0.3
-0.4
-0.9
-2.2
-1.6
carbon source
a-Ketoglutaric (C)
-1.9
-0.8
-0.8
-1.2
-0.6
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.6
-0.6
-1.0
-1.8
-1.3
stress
ALP with Cobalt chloride 0.2 mM
-0.3
-0.3
-1.1
-1.9
-1.7
stress
ALP with Nickel (II) chloride 3.5 mM
-0.7
-0.2
-1.2
-1.6
-1.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.6
-0.6
+0.2
-0.1
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-4.8
-0.4
+0.3
+0.0
+0.0
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-3.1
-2.1
+0.5
+0.2
+0.4
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