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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0624 and Dsui_0625 are separated by 2 nucleotides
Dsui_0625 and Dsui_0626 are separated by 2 nucleotides
Dsui_0626 and Dsui_0627 overlap by 8 nucleotides
Dsui_0627 and Dsui_0628 overlap by 1 nucleotides
Dsui_0624: Dsui_0624 - hypothetical protein, at 618,501 to 619,610
_0624
Dsui_0625: Dsui_0625 - putative metal-sulfur cluster biosynthetic enzyme, at 619,613 to 619,924
_0625
Dsui_0626: Dsui_0626 - ABC-type branched-chain amino acid transport systems, ATPase component, at 619,927 to 620,643
_0626
Dsui_0627: Dsui_0627 - ABC-type branched-chain amino acid transport systems, ATPase component, at 620,636 to 621,439
_0627
Dsui_0628: Dsui_0628 - ABC-type branched-chain amino acid transport system, permease component, at 621,439 to 622,515
_0628
Group
Condition
Dsui
_0624
Dsui
_0625
Dsui
_0626
Dsui
_0627
Dsui
_0628
stress
ALP with Nickel (II) chloride 1.5 mM
-0.5
-0.9
-0.5
-0.9
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.8
-1.0
-0.4
-0.9
-0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.4
-1.0
-0.1
-0.1
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.5
-1.1
-0.2
-0.8
-0.0
stress
ALP with Dimethyl Sulfoxide 2 vol%
-1.4
+0.2
-0.1
-0.2
-0.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-0.1
+0.1
-0.6
-0.9
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.1
-0.2
-0.4
-0.2
-0.3
stress
ALP with Cobalt chloride 0.25 mM
-1.2
+0.1
-0.0
-0.3
-0.4
stress
ALP with Cisplatin 0.0007 mg/ml
-0.6
-0.4
-0.5
-0.3
+0.1
stress
ALP with Chloride 75 mM
-0.9
+0.2
+0.1
+0.0
-0.9
carbon source
D,L-Lactate (C)
-1.1
+0.2
-0.1
+0.0
-0.3
stress
ALP with Cobalt chloride 0.2 mM
-0.9
-0.1
+0.1
-0.1
-0.4
carbon source
L-Lactate (C)
-0.7
+0.2
-0.1
+0.0
-0.7
stress
ALP with perchlorate 6 mM
-0.1
+0.2
+0.1
-0.1
-1.2
stress
ALP with perchlorate 3 mM
-0.4
+0.1
+0.3
-0.2
-0.8
carbon source
pyruvate (C)
-0.6
+0.3
+0.2
-0.1
-0.7
stress
ALP with Nickel (II) chloride 3.5 mM
+0.4
-0.2
-0.0
-0.6
-0.5
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-1.2
-0.2
+0.5
+0.2
-0.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.2
+0.1
-0.4
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.1
+0.2
+0.2
-0.4
-0.7
stress
ALP with Bacitracin 0.2 mg/ml
-0.6
+0.3
+0.2
-0.1
-0.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-1.3
-0.3
+0.3
+0.4
+0.3
stress
ALP with perchlorate 12 mM
-0.2
+0.2
+0.2
+0.1
-0.8
stress
ALP with nitrate 75 mM
-0.8
+0.3
+0.6
+0.0
-0.2
carbon source
defined media with 30 mM sodium lactate
+0.5
+0.2
-0.4
+0.3
-0.3
stress
ALP with Cisplatin 0.0009 mg/ml
-0.6
+0.5
+0.1
+0.3
+0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
-0.4
+0.7
+0.1
+0.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.6
+0.2
-0.4
+0.3
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.3
-0.0
+0.9
+0.2
+0.4
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.1
+0.3
+0.7
+0.4
+0.7
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