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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0614 and Dsui_0615 overlap by 38 nucleotides
Dsui_0615 and Dsui_0616 are separated by 14 nucleotides
Dsui_0616 and Dsui_0617 are separated by 3 nucleotides
Dsui_0617 and Dsui_0618 are separated by 10 nucleotides
Dsui_0614: Dsui_0614 - hypothetical protein, at 609,566 to 609,901
_0614
Dsui_0615: Dsui_0615 - ABC-type transport system, involved in lipoprotein release, permease component, at 609,864 to 611,000
_0615
Dsui_0616: Dsui_0616 - ABC-type antimicrobial peptide transport system, ATPase component, at 611,015 to 611,689
_0616
Dsui_0617: Dsui_0617 - hypothetical protein, at 611,693 to 612,697
_0617
Dsui_0618: Dsui_0618 - putative lipoprotein involved in nitrous oxide reduction, at 612,708 to 613,274
_0618
Group
Condition
Dsui
_0614
Dsui
_0615
Dsui
_0616
Dsui
_0617
Dsui
_0618
stress
ALP with Cisplatin 0.0009 mg/ml
-1.3
-0.9
-0.7
-1.3
-1.7
stress
ALP with Cisplatin 0.0008 mg/ml
-0.9
-0.4
-1.0
-1.3
-1.7
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.0
-1.1
-0.1
-1.3
-1.9
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.4
-0.9
-0.7
-1.4
-2.0
alp richb
ALP
-0.2
-1.0
-0.6
-1.4
-1.9
stress
ALP with Chloride 75 mM
-0.6
-0.2
-0.7
-1.2
-2.5
stress
ALP with Nickel (II) chloride 1.5 mM
-0.5
-1.4
-0.8
-1.0
-1.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.5
-0.6
-0.6
-1.4
-1.9
stress
ALP with sodium fluoride 40 mM
-0.4
-1.0
-0.3
-1.3
-1.8
stress
ALP with nitrite 0.3 mM
-0.6
-0.6
-0.4
-1.3
-1.9
stress
ALP with nitrite 0.15 mM
-0.3
-0.7
-0.8
-1.3
-1.8
stress
ALP with Cisplatin 0.0007 mg/ml
-1.5
-0.4
-0.3
-1.2
-1.4
stress
ALP with perchlorate 12 mM
-0.4
-0.3
-0.2
-1.3
-2.6
stress
ALP with nitrite 0.45 mM
-0.4
-0.8
-0.4
-1.3
-1.9
carbon source
D-Lactate (C)
-0.6
-0.9
-0.3
-0.9
-2.0
stress
ALP with perchlorate 6 mM
+0.1
-0.6
-0.4
-1.2
-2.6
carbon source
pyruvate (C)
-0.5
-0.2
-0.7
-1.0
-2.2
stress
ALP with Fusidic 0.01 mg/ml
-0.3
-0.0
-0.8
-1.2
-2.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.3
-0.7
-0.1
-1.1
-2.2
stress
ALP with Bacitracin 0.2 mg/ml
-0.3
-0.3
-0.1
-1.2
-2.5
stress
ALP with sodium fluoride 30 mM
-0.7
-1.1
+0.1
-1.2
-1.7
carbon source
D-Lactate (C)
-0.1
-0.7
-0.6
-0.9
-2.1
stress
ALP with nitrate 75 mM
-0.0
-1.0
-0.2
-1.3
-1.8
stress
ALP with perchlorate 3 mM
-0.1
-0.7
-0.1
-1.3
-2.1
stress
ALP with Zinc 1 mM
-0.1
-0.9
-0.3
-1.2
-1.7
stress
ALP with Cobalt chloride 0.2 mM
-0.1
-1.0
-0.4
-1.2
-1.6
stress
ALP with nitrate 50 mM
-0.1
-0.7
-0.4
-1.3
-1.8
carbon source
D,L-Lactate (C)
-0.0
-0.6
-0.5
-1.0
-2.2
stress
ALP with Cobalt chloride 0.25 mM
-0.0
-1.2
-0.2
-1.2
-1.6
stress
ALP with Fusidic 0.007 mg/ml
+0.5
+0.0
-0.3
-1.3
-2.5
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