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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0604 and Dsui_0605 are separated by 16 nucleotides
Dsui_0605 and Dsui_0606 are separated by 84 nucleotides
Dsui_0606 and Dsui_0607 are separated by 11 nucleotides
Dsui_0607 and Dsui_0608 overlap by 7 nucleotides
Dsui_0604: Dsui_0604 - pilus retraction protein PilT, at 598,978 to 600,021
_0604
Dsui_0605: Dsui_0605 - pilus retraction protein PilT, at 600,038 to 601,174
_0605
Dsui_0606: Dsui_0606 - putative N6-adenine-specific DNA methylase, at 601,259 to 602,431
_0606
Dsui_0607: Dsui_0607 - putative membrane protein, at 602,443 to 602,859
_0607
Dsui_0608: Dsui_0608 - nucleoside-diphosphate-sugar epimerase, at 602,853 to 603,758
_0608
Group
Condition
Dsui
_0604
Dsui
_0605
Dsui
_0606
Dsui
_0607
Dsui
_0608
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-4.0
+0.2
+0.3
N.D.
-2.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.6
+0.4
+0.1
N.D.
-2.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.5
+0.1
+0.3
N.D.
-2.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.4
+0.1
+0.2
N.D.
-2.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.7
+0.2
+0.3
N.D.
-1.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.6
+0.2
+0.3
N.D.
-1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.6
+0.2
+0.3
N.D.
-1.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.6
+0.1
+0.2
N.D.
-1.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.4
+0.1
+0.3
N.D.
-1.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-3.0
+0.3
+0.2
N.D.
-1.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-3.2
+0.2
+0.3
N.D.
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.5
+0.3
+0.2
N.D.
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-2.8
+0.2
+0.4
N.D.
-0.5
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
-1.1
+0.0
-0.2
N.D.
-1.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.4
-0.0
-0.8
N.D.
-1.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.0
+0.1
+0.1
N.D.
-2.0
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-1.0
-0.0
+0.1
N.D.
-0.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.1
+0.3
-0.0
N.D.
-0.8
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
+0.1
+0.1
N.D.
-0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.0
+0.2
+0.2
N.D.
-2.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
+0.4
-0.2
N.D.
-0.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-1.0
+0.2
+0.2
N.D.
-0.9
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.0
+0.3
+0.2
N.D.
-1.9
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.1
+0.3
-0.0
N.D.
-1.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.8
+0.4
-0.2
N.D.
+1.7
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-3.0
+0.5
+0.0
N.D.
+2.0
stress
ALP with copper (II) chloride 0.6 mM
-1.0
+0.0
-0.2
N.D.
+0.8
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.7
+0.5
+0.0
N.D.
+2.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-2.6
+0.4
+0.2
N.D.
+1.9
stress
ALP with Nickel (II) chloride 2.5 mM
+0.2
+0.5
+0.3
N.D.
+1.5
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