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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
3
4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0555 and Dsui_0556 are separated by 21 nucleotides
Dsui_0556 and Dsui_0557 are separated by 26 nucleotides
Dsui_0557 and Dsui_0558 overlap by 33 nucleotides
Dsui_0558 and Dsui_0559 are separated by 180 nucleotides
Dsui_0555: Dsui_0555 - hypothetical protein, at 557,404 to 557,784
_0555
Dsui_0556: Dsui_0556 - ferredoxin III, nif-specific, at 557,806 to 558,105
_0556
Dsui_0557: Dsui_0557 - NifQ, at 558,132 to 558,557
_0557
Dsui_0558: Dsui_0558 - tetratricopeptide repeat protein, at 558,525 to 559,973
_0558
Dsui_0559: Dsui_0559 - alkylphosphonate utilization operon protein PhnA, at 560,154 to 560,495
_0559
Group
Condition
Dsui
_0555
Dsui
_0556
Dsui
_0557
Dsui
_0558
Dsui
_0559
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
N.D.
-2.2
-2.5
-0.1
alp richb
ALP
N.D.
N.D.
-2.1
-2.4
-0.1
stress
ALP with nitrite 0.3 mM
N.D.
N.D.
-2.0
-2.3
-0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
N.D.
N.D.
-2.1
-2.4
-0.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
-2.1
-2.4
-0.0
stress
ALP with nitrite 0.15 mM
N.D.
N.D.
-2.0
-2.3
-0.1
stress
ALP with nitrite 0.45 mM
N.D.
N.D.
-2.0
-2.4
+0.0
stress
ALP with Zinc 2 mM
N.D.
N.D.
-1.9
-2.2
-0.3
stress
ALP with nitrate 50 mM
N.D.
N.D.
-2.0
-2.3
+0.1
stress
ALP with Zinc 1 mM
N.D.
N.D.
-1.9
-2.2
-0.0
stress
ALP with nitrate 75 mM
N.D.
N.D.
-2.0
-2.3
+0.1
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
N.D.
-1.9
-2.2
-0.0
stress
ALP with sodium fluoride 40 mM
N.D.
N.D.
-2.0
-2.1
+0.1
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
N.D.
-1.6
-1.9
-0.4
stress
ALP with sodium fluoride 30 mM
N.D.
N.D.
-1.8
-1.8
-0.2
stress
ALP with Cobalt chloride 0.25 mM
N.D.
N.D.
-1.8
-2.1
+0.0
stress
ALP with Cobalt chloride 0.2 mM
N.D.
N.D.
-1.8
-2.1
+0.1
stress
ALP with perchlorate 3 mM
N.D.
N.D.
-1.4
-2.4
+0.0
stress
ALP with Nickel (II) chloride 3.5 mM
N.D.
N.D.
-1.7
-2.0
-0.1
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
N.D.
-1.8
-2.2
+0.3
stress
ALP with perchlorate 12 mM
N.D.
N.D.
-1.3
-2.3
-0.0
stress
ALP with Fusidic 0.02 mg/ml
N.D.
N.D.
-1.2
-2.2
-0.3
stress
ALP with Nickel (II) chloride 1.5 mM
N.D.
N.D.
-1.5
-1.8
-0.2
stress
ALP with Fusidic 0.01 mg/ml
N.D.
N.D.
-1.1
-2.2
-0.1
stress
ALP with Bacitracin 0.2 mg/ml
N.D.
N.D.
-1.2
-2.2
+0.1
stress
ALP with Chloride 75 mM
N.D.
N.D.
-1.2
-2.2
+0.2
stress
ALP with perchlorate 6 mM
N.D.
N.D.
-1.3
-1.8
-0.1
carbon source
D-Lactate (C)
N.D.
N.D.
-0.8
-1.8
-0.4
carbon source
D,L-Lactate (C)
N.D.
N.D.
-1.0
-2.0
+0.0
stress
ALP with Dimethyl Sulfoxide 2 vol%
N.D.
N.D.
-1.0
-1.9
+0.2
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Dsui_0557
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