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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
3
4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0535 and Dsui_0536 are separated by 10 nucleotides
Dsui_0536 and Dsui_0537 are separated by 121 nucleotides
Dsui_0537 and Dsui_0538 are separated by 55 nucleotides
Dsui_0538 and Dsui_0539 are separated by 9 nucleotides
Dsui_0535: Dsui_0535 - hypothetical protein, at 540,059 to 540,304
_0535
Dsui_0536: Dsui_0536 - hemerythrin-like metal-binding domain-containing protein, at 540,315 to 541,775
_0536
Dsui_0537: Dsui_0537 - conserved protein of DIM6/NTAB family, at 541,897 to 542,436
_0537
Dsui_0538: Dsui_0538 - hypothetical protein, at 542,492 to 543,235
_0538
Dsui_0539: Dsui_0539 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 543,245 to 544,129
_0539
Group
Condition
Dsui
_0535
Dsui
_0536
Dsui
_0537
Dsui
_0538
Dsui
_0539
stress
ALP with Zinc 2 mM
+0.0
-0.6
-1.5
-0.4
-0.8
stress
ALP with Chloride 75 mM
+0.2
-1.5
-0.5
-1.1
-0.3
stress
ALP with nitrite 0.3 mM
-0.0
-0.9
-0.9
-0.8
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
+0.0
-0.7
-1.0
-1.1
-0.3
carbon source
propionate (C)
+0.1
-1.1
-0.8
-1.1
-0.1
carbon source
L-Lactate (C)
+0.1
-0.8
-0.8
-1.2
-0.1
stress
ALP with perchlorate 12 mM
+0.1
-1.2
-1.0
-0.4
-0.2
carbon source
D-Lactate (C)
+0.0
-0.6
-0.6
-1.1
-0.5
carbon source
D,L-Lactate (C)
+0.1
-0.6
-0.8
-1.1
-0.2
stress
ALP with perchlorate 6 mM
+0.0
-1.6
-0.5
-0.4
-0.1
stress
ALP with Cobalt chloride 0.25 mM
+0.4
-1.3
-0.6
-0.8
-0.2
carbon source
pyruvate (C)
-0.0
-0.8
-0.7
-0.8
-0.1
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.1
-0.7
-1.0
-0.5
-0.2
stress
ALP with nitrite 0.15 mM
+0.3
-0.9
-1.6
+0.1
-0.3
stress
ALP with nitrite 0.45 mM
+0.2
-1.1
-1.7
+0.4
-0.2
stress
ALP with Zinc 1 mM
+0.0
-0.7
-1.0
-0.6
+0.0
carbon source
D-Lactate (C)
+0.2
-1.2
-0.5
-0.6
-0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
+0.2
-0.7
-1.7
+0.0
+0.0
stress
ALP with Fusidic 0.01 mg/ml
-0.3
-0.9
-0.9
+0.0
+0.0
stress
ALP with perchlorate 3 mM
+0.1
-1.3
-0.1
-0.7
+0.0
carbon source
propionate (C)
+0.2
-1.2
+0.4
-0.7
-0.5
stress
ALP with Fusidic 0.02 mg/ml
-0.2
-0.8
+0.6
-1.1
-0.3
carbon source
R2A with sodium pyruvate
+0.6
+0.1
-0.2
-1.9
-0.3
stress
ALP with Cisplatin 0.0009 mg/ml
+0.0
-0.5
-1.2
+0.4
-0.3
stress
ALP with Fusidic 0.007 mg/ml
+0.2
-1.1
+0.5
-0.5
-0.3
stress
ALP with sodium fluoride 30 mM
+0.4
-0.7
-1.4
+0.6
-0.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-0.2
-0.6
-0.7
+0.5
stress
ALP with Nickel (II) chloride 2.5 mM
+0.6
-0.5
-0.6
+0.6
-0.8
carbon source
defined media with 30 mM sodium lactate
+0.6
+0.3
+0.2
-1.6
+0.3
alp rich
rich media
+0.2
-0.4
+0.5
+0.9
-0.3
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Dsui_0536
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Dsui_0537
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Dsui_0538
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Dsui_0539
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