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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
3
4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0524 and Dsui_0525 overlap by 11 nucleotides
Dsui_0525 and Dsui_0527 are separated by 288 nucleotides
Dsui_0527 and Dsui_0528 overlap by 4 nucleotides
Dsui_0528 and Dsui_0529 are separated by 485 nucleotides
Dsui_0524: Dsui_0524 - putative permease, at 531,405 to 532,208
_0524
Dsui_0525: Dsui_0525 - hypothetical protein, at 532,198 to 532,668
_0525
Dsui_0527: Dsui_0527 - hypothetical protein, at 532,957 to 533,286
_0527
Dsui_0528: Dsui_0528 - hypothetical protein, at 533,283 to 533,486
_0528
Dsui_0529: Dsui_0529 - outer membrane cobalamin receptor protein, at 533,972 to 535,936
_0529
Group
Condition
Dsui
_0524
Dsui
_0525
Dsui
_0527
Dsui
_0528
Dsui
_0529
stress
ALP with Fusidic 0.007 mg/ml
-0.1
-1.5
-1.2
-0.2
-0.8
stress
ALP with Fusidic 0.01 mg/ml
-0.3
-1.1
-0.3
-0.4
-0.9
alp richb
ALP
-0.1
-1.4
-1.0
-0.0
-0.4
stress
ALP with nitrate 50 mM
-0.1
-1.4
-1.5
+0.3
-0.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-0.2
-1.5
-0.9
-0.2
-0.0
carbon source
D-Lactate (C)
-0.1
-1.0
-1.3
-0.1
-0.0
stress
ALP with Cisplatin 0.0009 mg/ml
+0.0
-1.1
-1.0
-0.3
-0.1
stress
ALP with Chloride 75 mM
-0.2
-1.5
-0.5
-0.0
-0.2
stress
ALP with Cisplatin 0.0008 mg/ml
-0.0
-1.2
-1.0
-0.1
-0.1
stress
ALP with Fusidic 0.02 mg/ml
-0.1
-0.7
-0.6
-0.2
-0.8
stress
ALP with nitrite 0.45 mM
-0.1
-1.3
-0.5
-0.0
-0.4
stress
ALP with nitrate 75 mM
-0.2
-1.3
-0.7
+0.2
-0.1
stress
ALP with nitrite 0.3 mM
-0.1
-1.3
-0.5
+0.1
-0.1
stress
ALP with Zinc 2 mM
-0.3
-1.1
-0.6
+0.3
-0.3
stress
ALP with perchlorate 3 mM
-0.1
-1.6
-0.4
+0.2
-0.1
stress
ALP with Nickel (II) chloride 3.5 mM
-0.3
-1.0
-0.4
-0.1
-0.2
stress
ALP with sodium fluoride 30 mM
-0.1
-1.1
-0.6
-0.0
-0.0
stress
ALP with Zinc 1 mM
-0.1
-1.2
-0.6
+0.2
-0.2
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.1
-1.4
-0.3
-0.1
-0.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.1
+0.1
-1.3
-0.4
-0.3
carbon source
pyruvate (C)
-0.4
-1.2
-0.1
+0.1
-0.0
stress
ALP with perchlorate 6 mM
-0.1
-1.4
-0.3
+0.2
+0.0
stress
ALP with Bacitracin 0.2 mg/ml
-0.1
-1.5
-0.2
+0.3
-0.1
stress
ALP with nitrite 0.15 mM
-0.2
-1.3
-0.1
+0.3
-0.1
carbon source
L-Lactate (C)
-0.1
-1.2
-0.3
+0.3
-0.0
stress
ALP with perchlorate 12 mM
-0.0
-1.4
-0.1
+0.4
+0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
-0.2
-0.4
+0.5
-0.5
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.4
-0.0
-0.6
+1.1
-0.5
stress
ALP with Nickel (II) chloride 2.5 mM
+0.5
-0.2
+0.6
+0.4
-0.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.2
+0.5
+0.5
+0.8
-0.2
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Dsui_0527
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Dsui_0529
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