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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0470 and Dsui_0471 overlap by 16 nucleotides
Dsui_0471 and Dsui_0472 are separated by 10 nucleotides
Dsui_0472 and Dsui_0473 are separated by 83 nucleotides
Dsui_0473 and Dsui_0474 are separated by 83 nucleotides
Dsui_0470: Dsui_0470 - fructose-2,6-bisphosphatase, at 477,597 to 478,166
_0470
Dsui_0471: Dsui_0471 - cobalamin 5''-phosphate synthase/cobalamin synthase, at 478,151 to 478,927
_0471
Dsui_0472: Dsui_0472 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 478,938 to 479,993
_0472
Dsui_0473: Dsui_0473 - adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase, at 480,077 to 480,655
_0473
Dsui_0474: Dsui_0474 - universal stress protein UspA-like protein, at 480,739 to 481,191
_0474
Group
Condition
Dsui
_0470
Dsui
_0471
Dsui
_0472
Dsui
_0473
Dsui
_0474
carbon source
propionate (C)
-1.6
-1.5
-1.2
-1.0
+0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.6
-0.1
-1.1
-0.6
-2.9
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
-0.4
-0.8
-0.9
-1.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
-0.4
-0.4
-0.7
-2.3
carbon source
propionate (C)
-1.3
-0.7
-0.6
-0.8
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.6
-0.8
-0.5
-0.5
-2.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.0
-0.4
-0.5
-0.8
-1.8
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
-0.4
-0.6
-0.7
-1.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.4
-0.1
-0.6
-0.5
-2.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
-0.5
-0.4
-0.7
-1.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.0
-0.2
-0.4
-0.7
-1.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
-0.3
-0.4
-0.6
-1.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.5
-0.3
-0.6
-0.6
-1.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
-0.1
-0.4
-0.8
-1.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
-0.1
-0.5
-0.4
-1.7
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.0
-1.2
-0.2
-0.1
-0.8
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.1
-0.6
-0.5
-0.0
-0.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
-0.1
-0.2
+0.2
-1.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.3
+0.2
-0.2
+0.0
-0.9
stress
ALP with Cobalt chloride 0.25 mM
-0.2
-0.4
-0.6
-0.7
+0.5
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.4
-0.0
-0.6
+0.3
-0.5
stress
ALP with Nickel (II) chloride 2.5 mM
-1.2
+0.5
-0.5
-0.5
+0.7
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.0
+0.4
+0.1
+0.3
-1.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.3
+0.5
+0.3
+0.2
-0.8
alp rich
rich media
+0.7
-0.5
-0.5
+0.0
+0.3
carbon source
defined media with 30 mM sodium lactate
+0.6
-0.1
-0.6
-0.2
+0.4
carbon source
defined media with 30 mM sodium lactate
+0.6
+0.8
-0.0
+0.0
+0.5
stress
ALP with Fusidic 0.01 mg/ml
+1.1
+0.4
+0.6
+0.2
+0.0
stress
ALP with Fusidic 0.02 mg/ml
+1.5
+0.4
+0.6
-0.1
-0.0
stress
ALP with Fusidic 0.007 mg/ml
+1.2
+0.8
+0.7
+0.1
-0.3
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