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Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0464 and Dsui_0465 overlap by 14 nucleotides
Dsui_0465 and Dsui_0466 overlap by 26 nucleotides
Dsui_0466 and Dsui_0467 overlap by 1 nucleotides
Dsui_0467 and Dsui_0468 are separated by 39 nucleotides
Dsui_0464: Dsui_0464 - hypothetical protein, at 470,330 to 471,286
_0464
Dsui_0465: Dsui_0465 - ADP-heptose:LPS heptosyltransferase, at 471,273 to 472,451
_0465
Dsui_0466: Dsui_0466 - glycosyltransferase, at 472,426 to 473,532
_0466
Dsui_0467: Dsui_0467 - lipid A export permease/ATP-binding protein MsbA, at 473,532 to 475,286
_0467
Dsui_0468: Dsui_0468 - glycosyltransferase, at 475,326 to 476,465
_0468
Group
Condition
Dsui
_0464
Dsui
_0465
Dsui
_0466
Dsui
_0467
Dsui
_0468
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
-7.4
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.1
-4.9
N.D.
N.D.
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
-5.3
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
-3.7
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
-3.7
N.D.
N.D.
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-3.8
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.0
-3.3
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-3.6
N.D.
N.D.
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.1
-2.6
N.D.
N.D.
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+1.7
-4.8
N.D.
N.D.
N.D.
ALP with 3 all (C)s
-1.2
-1.8
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.2
-2.8
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
-2.6
N.D.
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.1
-2.5
N.D.
N.D.
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
-2.5
N.D.
N.D.
N.D.
alp rich
rich media
+0.1
-2.5
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-2.3
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
-2.1
N.D.
N.D.
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.3
-1.8
N.D.
N.D.
N.D.
carbon source
R2A with sodium pyruvate
+0.3
-2.4
N.D.
N.D.
N.D.
stress
ALP with Zinc 2 mM
+0.3
-2.4
N.D.
N.D.
N.D.
stress
ALP with Nickel (II) chloride 3.5 mM
+0.6
-2.4
N.D.
N.D.
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.1
-1.8
N.D.
N.D.
N.D.
stress
ALP with Nickel (II) chloride 1.5 mM
+0.1
-1.8
N.D.
N.D.
N.D.
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.5
-1.7
N.D.
N.D.
N.D.
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.9
+1.0
N.D.
N.D.
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+0.4
+1.7
N.D.
N.D.
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+1.0
+1.5
N.D.
N.D.
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+1.4
+1.7
N.D.
N.D.
N.D.
stress
ALP with copper (II) chloride 0.6 mM
+4.2
+0.6
N.D.
N.D.
N.D.
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