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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0457 and Dsui_0458 are separated by 44 nucleotides
Dsui_0458 and Dsui_0459 are separated by 26 nucleotides
Dsui_0459 and Dsui_0460 are separated by 25 nucleotides
Dsui_0460 and Dsui_0461 overlap by 4 nucleotides
Dsui_0457: Dsui_0457 - Protein of unknown function (DUF2782), at 461,826 to 462,176
_0457
Dsui_0458: Dsui_0458 - TIGR00730 family protein, at 462,221 to 462,949
_0458
Dsui_0459: Dsui_0459 - DNA polymerase I, at 462,976 to 465,708
_0459
Dsui_0460: Dsui_0460 - ADP-heptose:LPS heptosyltransferase, at 465,734 to 466,699
_0460
Dsui_0461: Dsui_0461 - glycosyltransferase, at 466,696 to 467,832
_0461
Group
Condition
Dsui
_0457
Dsui
_0458
Dsui
_0459
Dsui
_0460
Dsui
_0461
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
-2.0
-0.4
-3.6
-2.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
-1.8
-0.8
-1.7
-3.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
-2.3
-1.1
-2.5
-1.7
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.7
-2.1
-1.2
-1.2
-1.8
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
-1.4
-0.2
-2.3
-2.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
-2.3
-0.5
-1.4
-2.0
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
-1.6
-0.5
-1.8
-2.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-1.8
-0.4
-2.0
-1.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.6
-1.9
-0.3
-0.9
-0.9
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.3
-1.7
-0.6
-1.0
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.5
-1.7
-0.6
-0.3
-0.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.5
-0.2
-0.5
-1.9
-0.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.2
-1.6
-0.4
-0.9
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
+0.2
-1.5
-0.9
-0.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.3
-1.5
-0.2
-0.6
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.3
-1.1
-1.0
-0.5
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.5
-0.0
-0.7
+0.6
-0.9
ALP with 3 all (C)s
+0.1
+0.3
+1.2
-1.3
-0.7
stress
ALP with Nickel (II) chloride 2.5 mM
+2.1
+0.3
-0.6
-1.8
+0.8
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.0
+0.2
-1.2
+0.8
+1.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.2
-0.1
-0.8
+0.7
+1.4
carbon source
D,L-Lactate (C)
-0.1
-0.1
-0.7
+1.3
+0.9
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.9
-0.3
+0.4
+0.6
+1.6
carbon source
a-Ketoglutaric (C)
-0.1
-0.5
-0.5
+1.4
+1.1
carbon source
propionate (C)
-0.2
-0.6
-0.1
+1.6
+1.2
stress
ALP with Fusidic 0.01 mg/ml
-2.9
+0.1
-0.3
+4.1
+1.2
carbon source
propionate (C)
-0.2
-0.4
+0.1
+1.8
+1.0
stress
ALP with Fusidic 0.007 mg/ml
-2.6
-0.0
-0.3
+4.4
+1.1
stress
ALP with Fusidic 0.02 mg/ml
-2.7
+0.0
-0.2
+4.0
+1.5
stress
ALP with copper (II) chloride 0.6 mM
+1.9
+0.3
-0.9
+4.0
+3.6
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