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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0448 and Dsui_0449 are separated by 49 nucleotides
Dsui_0449 and Dsui_0450 are separated by 72 nucleotides
Dsui_0450 and Dsui_0451 are separated by 15 nucleotides
Dsui_0451 and Dsui_0452 are separated by 8 nucleotides
Dsui_0448: Dsui_0448 - hypothetical protein, at 455,178 to 456,083
_0448
Dsui_0449: Dsui_0449 - undecaprenyl-diphosphatase UppP, at 456,133 to 456,957
_0449
Dsui_0450: Dsui_0450 - MAF protein, at 457,030 to 457,650
_0450
Dsui_0451: Dsui_0451 - hypothetical protein, at 457,666 to 458,148
_0451
Dsui_0452: Dsui_0452 - iojap-like ribosome-associated protein, at 458,157 to 458,528
_0452
Group
Condition
Dsui
_0448
Dsui
_0449
Dsui
_0450
Dsui
_0451
Dsui
_0452
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.1
N.D.
-1.0
-0.5
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
N.D.
-1.0
-0.2
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.1
N.D.
-0.8
-0.2
-0.2
carbon source
D-Lactate (C)
-0.1
N.D.
-0.5
-0.0
-0.5
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.5
N.D.
+0.1
-0.2
-0.5
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.1
N.D.
-0.6
-0.3
-0.2
stress
rich media with hydrogen peroxide 5 mM
-0.1
N.D.
-0.4
-0.2
-0.2
stress
ALP with perchlorate 3 mM
-0.2
N.D.
-0.3
+0.1
-0.4
carbon source
D,L-Lactate (C)
-0.0
N.D.
-0.4
+0.1
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.2
N.D.
-0.1
+0.1
-0.6
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.3
N.D.
-0.3
+0.2
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
N.D.
-0.5
+0.2
-0.3
alp rich
rich media
+0.2
N.D.
-0.2
-0.2
-0.3
anaerobic
Anaero. lactate (C), nitrate electron acceptor
+0.2
N.D.
+0.3
+0.1
-1.0
alp rich
rich media
+0.1
N.D.
+0.3
-0.0
-0.5
carbon source
propionate (C)
+0.6
N.D.
-0.3
+0.1
-0.6
stress
ALP with Cobalt chloride 0.2 mM
-0.0
N.D.
-0.3
+0.5
-0.2
carbon source
propionate (C)
+0.6
N.D.
-0.2
+0.1
-0.4
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.3
N.D.
+0.3
+0.3
-0.6
carbon source
defined media with 40 mM sodium acetate
+0.3
N.D.
-0.2
+0.3
-0.1
stress
ALP with Cobalt chloride 0.25 mM
-0.0
N.D.
-0.5
+1.0
-0.1
carbon source
defined media with 30 mM sodium lactate
+0.3
N.D.
+0.3
+0.1
-0.3
stress
ALP with Cisplatin 0.0008 mg/ml
+0.3
N.D.
+0.0
+0.5
-0.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.1
N.D.
+0.4
+0.5
-0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.0
N.D.
+0.5
+0.3
+0.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.1
N.D.
+0.6
+0.4
+0.2
carbon source
R2A with sodium pyruvate
+0.2
N.D.
+0.4
+0.2
+0.2
stress
ALP with Nickel (II) chloride 2.5 mM
+0.4
N.D.
-0.2
+0.9
+0.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.2
N.D.
+0.5
+0.5
+0.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.1
N.D.
+0.8
+0.2
+0.3
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