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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0438 and Dsui_0439 are separated by 45 nucleotides
Dsui_0439 and Dsui_0440 are separated by 76 nucleotides
Dsui_0440 and Dsui_0441 are separated by 79 nucleotides
Dsui_0441 and Dsui_0442 are separated by 159 nucleotides
Dsui_0438: Dsui_0438 - cell wall-associated hydrolase, invasion-associated protein, at 445,512 to 446,003
_0438
Dsui_0439: Dsui_0439 - 2-nitropropane dioxygenase-like enzyme, at 446,049 to 446,996
_0439
Dsui_0440: Dsui_0440 - HDOD domain-containing protein, at 447,073 to 447,930
_0440
Dsui_0441: Dsui_0441 - Mg2+ transporter MgtE, at 448,010 to 449,452
_0441
Dsui_0442: Dsui_0442 - monofunctional biosynthetic peptidoglycan transglycosylase, at 449,612 to 450,304
_0442
Group
Condition
Dsui
_0438
Dsui
_0439
Dsui
_0440
Dsui
_0441
Dsui
_0442
carbon source
a-Ketoglutaric (C)
-1.3
+0.0
-0.0
N.D.
-0.5
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.2
+0.0
+0.0
N.D.
-0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
+0.3
+0.1
N.D.
+0.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
+0.2
+0.3
N.D.
-0.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.3
+0.4
+0.2
N.D.
+0.1
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.2
+0.3
+0.1
N.D.
+0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.1
+0.4
+0.1
N.D.
-0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.1
+0.4
+0.2
N.D.
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
+0.2
+0.3
N.D.
+0.2
carbon source
D-Lactate (C)
-0.6
-0.1
+0.2
N.D.
-0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.1
+0.3
+0.3
N.D.
-0.1
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.4
-0.3
+0.1
N.D.
+0.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.7
-0.1
+0.2
N.D.
+0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.3
-0.3
+0.1
N.D.
+0.2
stress
ALP with Fusidic 0.007 mg/ml
-0.1
-0.2
+0.4
N.D.
-0.3
anaerobic
Anaero. lactate (C), nitrate electron acceptor
-0.5
-0.1
+0.2
N.D.
+0.1
stress
rich media with sodium chlorite 0.16 mM
+0.2
-0.6
+0.1
N.D.
+0.1
stress
ALP with Zinc 2 mM
-0.4
-0.1
+0.1
N.D.
+0.2
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
+0.4
+0.3
N.D.
+0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.3
+0.7
+0.2
N.D.
+0.3
carbon source
R2A with sodium pyruvate
-0.5
+0.1
+0.0
N.D.
+0.3
carbon source
R2A with sodium pyruvate
-0.3
-0.0
+0.2
N.D.
+0.3
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.7
+0.5
+0.3
N.D.
+0.0
carbon source
R2A with sodium pyruvate
+0.3
+0.0
-0.4
N.D.
+0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.0
+0.4
+0.2
N.D.
+0.6
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.2
-0.2
-0.1
N.D.
+0.4
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
+0.2
-0.0
-0.2
N.D.
+0.4
carbon source
R2A with sodium pyruvate
+0.3
-0.1
+0.3
N.D.
+0.1
stress
ALP with Cobalt chloride 0.25 mM
-0.1
+0.5
+0.4
N.D.
-0.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.8
+0.9
+0.4
N.D.
+0.8
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