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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0432 and Dsui_0433 are separated by 93 nucleotides
Dsui_0433 and Dsui_0434 are separated by 51 nucleotides
Dsui_0434 and Dsui_0435 are separated by 64 nucleotides
Dsui_0435 and Dsui_0436 are separated by 227 nucleotides
Dsui_0432: Dsui_0432 - hypothetical protein, at 438,123 to 439,199
_0432
Dsui_0433: Dsui_0433 - collagenase-like protease, at 439,293 to 440,606
_0433
Dsui_0434: Dsui_0434 - ribonuclease, Rne/Rng family, at 440,658 to 442,139
_0434
Dsui_0435: Dsui_0435 - Sel1 repeat protein, at 442,204 to 442,791
_0435
Dsui_0436: Dsui_0436 - dienelactone hydrolase-like enzyme, at 443,019 to 443,903
_0436
Group
Condition
Dsui
_0432
Dsui
_0433
Dsui
_0434
Dsui
_0435
Dsui
_0436
stress
ALP with Fusidic 0.01 mg/ml
-1.1
+0.4
-3.1
-0.9
-1.7
stress
ALP with Fusidic 0.007 mg/ml
-0.1
-0.1
-3.2
-1.1
-1.6
stress
ALP with Fusidic 0.02 mg/ml
-0.6
-0.1
-2.7
-1.0
-1.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.2
-0.3
-1.3
-1.1
-1.9
carbon source
D-Lactate (C)
-1.4
-0.1
-1.2
-0.7
-1.8
stress
ALP with perchlorate 6 mM
-0.8
-0.4
-0.4
-1.2
-2.3
stress
ALP with Chloride 75 mM
-1.0
-0.1
-1.3
-1.1
-1.6
carbon source
D,L-Lactate (C)
-1.0
-0.2
-1.3
-0.7
-1.8
carbon source
D,L-Lactate (C)
-0.8
-0.2
-0.9
-0.8
-1.9
carbon source
pyruvate (C)
-0.9
-0.4
-0.7
-0.7
-1.8
carbon source
D-Lactate (C)
-1.0
+0.1
-1.1
-0.6
-1.8
carbon source
pyruvate (C)
-1.1
-0.4
-1.0
-0.1
-1.7
carbon source
L-Lactate (C)
-0.3
-0.3
-1.2
-0.7
-1.5
stress
ALP with perchlorate 3 mM
+0.0
-0.4
-0.1
-1.2
-2.1
stress
ALP with Cobalt chloride 0.25 mM
-0.4
-0.2
-2.9
+0.0
-0.1
stress
ALP with Cobalt chloride 0.2 mM
-0.3
-0.4
-2.1
-0.1
-0.4
carbon source
defined media with 30 mM sodium lactate
-1.1
-0.0
-1.1
-0.7
-0.4
stress
ALP with perchlorate 12 mM
-0.0
+0.0
-0.4
-0.7
-2.3
stress
ALP with Dimethyl Sulfoxide 2 vol%
-0.4
+0.1
-0.3
-0.9
-1.8
carbon source
L-Lactate (C)
-0.6
+0.1
-0.4
-0.6
-1.7
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.9
+0.5
-1.4
-0.1
-0.4
stress
ALP with Cisplatin 0.0009 mg/ml
-1.7
-0.4
-0.6
-0.0
-0.3
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.8
+0.5
-1.7
-0.5
-0.6
carbon source
defined media with 40 mM sodium acetate
-0.7
-0.2
-1.6
-0.6
+0.0
stress
ALP with Nickel (II) chloride 3.5 mM
-0.8
-0.2
-2.0
+0.1
-0.2
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.0
+0.2
-1.9
+0.2
-0.0
carbon source
R2A with sodium pyruvate
+0.7
-0.1
-1.5
-0.6
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.1
+0.4
-1.5
-1.0
+0.1
stress
ALP with copper (II) chloride 0.6 mM
-0.8
-1.0
-1.7
+1.4
+1.0
stress
ALP with Nickel (II) chloride 2.5 mM
-0.4
+0.2
-1.4
+0.9
+0.7
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