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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0406 and Dsui_0407 are separated by 9 nucleotides
Dsui_0407 and Dsui_0408 are separated by 65 nucleotides
Dsui_0408 and Dsui_0409 overlap by 4 nucleotides
Dsui_0409 and Dsui_0410 are separated by 26 nucleotides
Dsui_0406: Dsui_0406 - Rhodanese-related sulfurtransferase, at 405,185 to 405,508
_0406
Dsui_0407: Dsui_0407 - protein-L-isoaspartate carboxylmethyltransferase, at 405,518 to 406,183
_0407
Dsui_0408: Dsui_0408 - cation/multidrug efflux pump, at 406,249 to 409,452
_0408
Dsui_0409: Dsui_0409 - RND family efflux transporter, MFP subunit, at 409,449 to 410,603
_0409
Dsui_0410: Dsui_0410 - transcriptional regulator, at 410,630 to 411,265
_0410
Group
Condition
Dsui
_0406
Dsui
_0407
Dsui
_0408
Dsui
_0409
Dsui
_0410
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
N.D.
-0.5
-0.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
N.D.
-0.6
-0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
N.D.
-0.6
+0.1
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.9
N.D.
-0.4
+0.3
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
N.D.
-0.5
+0.0
N.D.
stress
rich media with sodium chlorite 0.16 mM
+0.1
N.D.
+0.2
-1.2
N.D.
stress
ALP with copper (II) chloride 0.6 mM
+0.1
N.D.
-0.2
-0.6
N.D.
carbon source
defined media with 30 mM sodium lactate
+0.1
N.D.
+0.1
-0.6
N.D.
carbon source
defined media with 30 mM sodium lactate
+0.3
N.D.
+0.1
-0.7
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
N.D.
-0.5
+0.1
N.D.
carbon source
L-Lactate (C)
-0.4
N.D.
+0.1
+0.2
N.D.
stress
ALP with Cobalt chloride 0.25 mM
-0.5
N.D.
+0.1
+0.4
N.D.
carbon source
defined media with 30 mM sodium lactate
+0.3
N.D.
+0.0
-0.4
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-0.3
+0.2
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.4
N.D.
+0.2
-0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
N.D.
+0.4
-0.3
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
N.D.
+0.4
-0.3
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
+0.1
N.D.
+0.3
+0.3
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.2
N.D.
+0.5
+0.0
N.D.
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.6
N.D.
+0.2
-0.0
N.D.
stress
ALP with Zinc 2 mM
+0.3
N.D.
+0.2
+0.3
N.D.
stress
ALP with nitrate 50 mM
+0.2
N.D.
+0.2
+0.3
N.D.
carbon source
propionate (C)
+0.1
N.D.
+0.3
+0.4
N.D.
anaerobic
Anaerobic growth in rich media with perchlorate electron acceptor
+0.9
N.D.
-0.0
+0.1
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
+0.3
N.D.
+0.3
+0.4
N.D.
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
+0.5
N.D.
+0.4
+0.2
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
+0.5
N.D.
+0.5
+0.8
N.D.
stress
ALP with Fusidic 0.007 mg/ml
+0.1
N.D.
+2.3
+2.5
N.D.
stress
ALP with Fusidic 0.02 mg/ml
+0.4
N.D.
+2.2
+2.4
N.D.
stress
ALP with Fusidic 0.01 mg/ml
+0.5
N.D.
+2.5
+2.6
N.D.
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