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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0387 and Dsui_0388 are separated by 88 nucleotides
Dsui_0388 and Dsui_0389 are separated by 12 nucleotides
Dsui_0389 and Dsui_0390 are separated by 6 nucleotides
Dsui_0390 and Dsui_0391 overlap by 4 nucleotides
Dsui_0387: Dsui_0387 - 3-dehydroquinate dehydratase, type II, at 386,578 to 387,078
_0387
Dsui_0388: Dsui_0388 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 387,167 to 387,616
_0388
Dsui_0389: Dsui_0389 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 387,629 to 388,996
_0389
Dsui_0390: Dsui_0390 - ribosomal protein L11 methyltransferase, at 389,003 to 389,890
_0390
Dsui_0391: Dsui_0391 - Protein of unknown function (DUF3426), at 389,887 to 390,879
_0391
Group
Condition
Dsui
_0387
Dsui
_0388
Dsui
_0389
Dsui
_0390
Dsui
_0391
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.8
-2.0
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
N.D.
-0.1
-2.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-0.8
-1.2
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
N.D.
N.D.
N.D.
-1.1
-0.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.6
-1.1
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
-0.1
-1.6
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.9
-0.6
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
-0.1
-1.2
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.7
-0.6
stress
ALP with Fusidic 0.007 mg/ml
N.D.
N.D.
N.D.
-0.1
-1.1
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
N.D.
N.D.
-0.7
-0.5
carbon source
defined media with 30 mM sodium lactate
N.D.
N.D.
N.D.
-0.1
-0.9
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
N.D.
N.D.
-0.6
-0.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
N.D.
N.D.
N.D.
-0.5
-0.5
carbon source
defined media with 40 mM sodium acetate
N.D.
N.D.
N.D.
+0.2
-0.8
anaerobic
Anaero. lactate (C), nitrate electron acceptor
N.D.
N.D.
N.D.
+0.3
-0.8
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
N.D.
-0.4
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.3
+1.1
carbon source
R2A with sodium pyruvate
N.D.
N.D.
N.D.
+0.1
+0.9
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.1
+1.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.1
+1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.1
+1.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.1
+1.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.2
+1.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.0
+1.5
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.1
+1.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
-0.0
+1.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.1
+1.5
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
N.D.
N.D.
+0.3
+1.4
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
N.D.
N.D.
+0.2
+1.6
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