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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0285 and Dsui_0286 overlap by 4 nucleotides
Dsui_0286 and Dsui_0287 are separated by 237 nucleotides
Dsui_0287 and Dsui_0288 are separated by 52 nucleotides
Dsui_0288 and Dsui_0289 are separated by 443 nucleotides
Dsui_0285: Dsui_0285 - methionine aminopeptidase, type I, at 285,562 to 286,386
_0285
Dsui_0286: Dsui_0286 - Protein of unknown function (DUF3423), at 286,383 to 286,613
_0286
Dsui_0287: Dsui_0287 - outer membrane protein/peptidoglycan-associated (lipo)protein, at 286,851 to 287,327
_0287
Dsui_0288: Dsui_0288 - hypothetical protein, at 287,380 to 287,595
_0288
Dsui_0289: Dsui_0289 - putative membrane protein, at 288,039 to 288,356
_0289
Group
Condition
Dsui
_0285
Dsui
_0286
Dsui
_0287
Dsui
_0288
Dsui
_0289
stress
ALP with Cisplatin 0.0009 mg/ml
-1.0
+0.3
+0.2
+0.0
-2.5
stress
ALP with Cisplatin 0.0007 mg/ml
-0.8
+0.2
+0.1
-0.0
-2.0
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.8
+0.2
+0.5
+0.0
-1.6
stress
ALP with sodium fluoride 40 mM
-0.8
+0.2
+0.1
+0.1
-1.0
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-0.9
+0.2
+0.1
+0.1
-1.0
stress
ALP with nitrate 75 mM
-0.8
+0.2
-1.1
+0.3
-0.1
stress
ALP with nitrite 0.15 mM
-0.6
+0.2
+0.3
+0.2
-1.3
stress
ALP with Cisplatin 0.0008 mg/ml
-0.8
+0.2
+0.3
+0.2
-1.0
stress
ALP with Zinc 2 mM
-0.9
+0.2
+0.3
+0.3
-0.8
stress
ALP with nitrite 0.3 mM
-0.8
+0.2
+0.3
+0.1
-0.7
stress
ALP with Cobalt chloride 0.2 mM
-0.5
+0.2
+0.5
+0.2
-0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
+0.4
-0.3
+0.5
-1.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.3
+0.7
+0.1
+0.7
-1.6
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.3
+0.6
+0.3
+0.8
-1.8
stress
ALP with Cobalt chloride 0.25 mM
-0.9
+0.4
+0.6
+0.4
-0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.6
+0.2
+0.7
-1.3
stress
ALP with Nickel (II) chloride 3.5 mM
-1.1
+0.3
+0.5
+0.2
+0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.6
+0.2
+0.8
-1.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.5
-0.0
+0.9
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.5
+0.6
+0.3
+0.9
-1.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
+0.6
+0.0
+0.7
-0.7
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.4
+0.6
+0.2
+0.8
-1.2
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.4
+0.4
+0.3
+0.9
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
+0.6
+0.2
+0.7
-0.9
stress
ALP with Nickel (II) chloride 2.5 mM
-0.7
+0.6
+1.0
+0.6
-0.4
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.6
+0.2
+0.8
-0.7
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.6
+0.2
+0.7
-0.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.2
+0.3
+0.5
+0.2
+1.0
carbon source
a-Ketoglutaric (C)
-0.1
+0.1
+0.2
+0.2
+1.8
carbon source
a-Ketoglutaric (C)
+0.1
+0.2
+0.2
+0.3
+1.6
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