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Fitness for 5 genes in
Dechlorosoma suillum PS
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0217 and Dsui_0218 overlap by 62 nucleotides
Dsui_0218 and Dsui_0219 are separated by 197 nucleotides
Dsui_0219 and Dsui_0220 are separated by 205 nucleotides
Dsui_0220 and Dsui_0221 are separated by 142 nucleotides
Dsui_0217: Dsui_0217 - hypothetical protein, at 215,763 to 215,936
_0217
Dsui_0218: Dsui_0218 - Integrase, at 215,875 to 217,176
_0218
Dsui_0219: Dsui_0219 - anthranilate synthase component I, at 217,374 to 218,849
_0219
Dsui_0220: Dsui_0220 - 2-phosphoglycolate phosphatase, at 219,055 to 219,717
_0220
Dsui_0221: Dsui_0221 - ribulose-phosphate 3-epimerase, at 219,860 to 220,549
_0221
Group
Condition
Dsui
_0217
Dsui
_0218
Dsui
_0219
Dsui
_0220
Dsui
_0221
carbon source
a-Ketoglutaric (C)
N.D.
-0.0
N.D.
-0.9
N.D.
stress
ALP with copper (II) chloride 0.6 mM
N.D.
-0.2
N.D.
-0.7
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
+0.2
N.D.
-0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.5
N.D.
+0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.5
N.D.
+0.2
N.D.
stress
ALP with Thallium(I) acetate 0.002 mg/ml
N.D.
+0.3
N.D.
+0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.5
N.D.
+0.2
N.D.
stress
ALP with Nickel (II) chloride 2.5 mM
N.D.
+0.2
N.D.
+0.5
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.6
N.D.
+0.1
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
+0.3
N.D.
+0.4
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.6
N.D.
+0.2
N.D.
stress
ALP with Cisplatin 0.0009 mg/ml
N.D.
+0.8
N.D.
-0.0
N.D.
stress
ALP with Thallium(I) acetate 0.004 mg/ml
N.D.
+0.4
N.D.
+0.3
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.7
N.D.
+0.1
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.5
N.D.
+0.3
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
+0.5
N.D.
+0.2
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.6
N.D.
+0.2
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
+0.4
N.D.
+0.4
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
+0.4
N.D.
+0.4
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
N.D.
+0.6
N.D.
+0.3
N.D.
stress
ALP with Fusidic 0.007 mg/ml
N.D.
+0.3
N.D.
+0.6
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
N.D.
+0.6
N.D.
+0.4
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.1
N.D.
+0.9
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.2
N.D.
+0.9
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
N.D.
+0.4
N.D.
+0.6
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
N.D.
+0.7
N.D.
+0.4
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.2
N.D.
+0.9
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
N.D.
+1.1
N.D.
+0.1
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
N.D.
+0.2
N.D.
+1.1
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
N.D.
+1.1
N.D.
+0.3
N.D.
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