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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0195 and Dsui_0196 are separated by 73 nucleotides
Dsui_0196 and Dsui_0197 are separated by 69 nucleotides
Dsui_0197 and Dsui_0198 are separated by 6 nucleotides
Dsui_0198 and Dsui_0199 overlap by 4 nucleotides
Dsui_0195: Dsui_0195 - Caudovirus prohead protease, at 196,123 to 197,463
_0195
Dsui_0196: Dsui_0196 - hypothetical protein, at 197,537 to 199,060
_0196
Dsui_0197: Dsui_0197 - hypothetical protein, at 199,130 to 199,480
_0197
Dsui_0198: Dsui_0198 - phage conserved hypothetical protein, phiE125 gp8 family, at 199,487 to 200,035
_0198
Dsui_0199: Dsui_0199 - Bacteriophage protein of unknown function (DUF646), at 200,032 to 200,517
_0199
Group
Condition
Dsui
_0195
Dsui
_0196
Dsui
_0197
Dsui
_0198
Dsui
_0199
stress
ALP with perchlorate 6 mM
-1.6
-1.3
-1.1
-0.0
-0.8
stress
ALP with perchlorate 3 mM
-1.6
-1.3
-1.1
-0.1
-0.5
stress
ALP with perchlorate 12 mM
-1.5
-1.1
-1.0
-0.2
-0.7
carbon source
D,L-Lactate (C)
-1.3
-1.0
-0.9
-0.4
-0.5
stress
ALP with nitrite 0.45 mM
-1.2
-1.2
-0.4
+0.1
-1.4
stress
ALP with nitrite 0.3 mM
-1.1
-1.2
-0.4
+0.1
-1.4
stress
ALP with Zinc 2 mM
-1.0
-1.1
-0.5
-0.1
-1.3
carbon source
L-Lactate (C)
-1.2
-0.9
-0.8
-0.6
-0.4
stress
ALP with nitrate 50 mM
-1.1
-1.2
-0.4
+0.3
-1.4
stress
ALP with Zinc 1 mM
-1.2
-0.5
-0.5
-0.2
-1.4
stress
ALP with nitrite 0.15 mM
-1.1
-1.1
-0.4
+0.3
-1.4
stress
ALP with sodium fluoride 40 mM
-1.1
-1.2
-0.4
+0.4
-1.4
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-1.1
-0.8
-0.8
-0.7
-0.2
carbon source
D-Lactate (C)
-1.2
-0.9
-0.8
-0.4
-0.4
carbon source
D-Lactate (C)
-1.2
-0.8
-0.8
-0.4
-0.3
stress
ALP with Chloride 75 mM
-1.3
-1.1
-0.9
-0.0
-0.2
alp richb
ALP
-0.8
-1.2
-0.5
+0.4
-1.5
carbon source
pyruvate (C)
-1.3
-0.8
-0.9
-0.2
-0.4
stress
ALP with Bacitracin 0.2 mg/ml
-1.3
-0.9
-0.9
+0.1
-0.5
carbon source
D,L-Lactate (C)
-1.2
-0.8
-0.9
-0.2
-0.4
stress
ALP with nitrate 75 mM
-1.1
-1.1
-0.4
+0.4
-1.3
carbon source
L-Lactate (C)
-1.1
-0.8
-0.8
-0.4
-0.3
stress
ALP with sodium fluoride 30 mM
-0.9
-1.1
-0.4
+0.6
-1.3
stress
ALP with Thallium(I) acetate 0.003 mg/ml
-1.0
-0.9
-0.3
+0.5
-1.2
stress
ALP with Thallium(I) acetate 0.002 mg/ml
-1.0
-1.1
-0.3
+0.8
-1.3
stress
ALP with Thallium(I) acetate 0.004 mg/ml
-0.9
-0.9
-0.1
+0.5
-1.1
stress
ALP with Cisplatin 0.0009 mg/ml
-1.1
-1.1
-0.5
+2.5
-1.3
stress
ALP with Nickel (II) chloride 3.5 mM
-0.8
-0.8
+1.2
+0.1
-1.1
stress
ALP with Cisplatin 0.0008 mg/ml
-1.0
-0.2
-0.5
+2.6
-0.9
stress
ALP with Cisplatin 0.0007 mg/ml
-0.7
-0.4
-0.3
+2.6
-1.0
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