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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0155 and Dsui_0156 are separated by 171 nucleotides
Dsui_0156 and Dsui_0157 are separated by 10 nucleotides
Dsui_0157 and Dsui_0158 are separated by 64 nucleotides
Dsui_0158 and Dsui_0160 are separated by 841 nucleotides
Dsui_0155: Dsui_0155 - RNA polymerase sigma factor, sigma-70 family, at 161,234 to 161,806
_0155
Dsui_0156: Dsui_0156 - thiosulfate reductase cytochrome B subunit (membrane anchoring protein), at 161,978 to 162,574
_0156
Dsui_0157: Dsui_0157 - sulfite oxidase-like oxidoreductase, at 162,585 to 163,373
_0157
Dsui_0158: Dsui_0158 - pentapeptide MXKDX repeat protein, at 163,438 to 163,677
_0158
Dsui_0160: Dsui_0160 - hypothetical protein, at 164,519 to 165,292
_0160
Group
Condition
Dsui
_0155
Dsui
_0156
Dsui
_0157
Dsui
_0158
Dsui
_0160
stress
ALP with perchlorate 6 mM
+0.0
-1.7
-1.6
-1.3
-1.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.3
-1.2
-1.0
-1.1
-0.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.3
-1.2
-1.0
-1.0
-0.1
stress
ALP with perchlorate 12 mM
+0.0
-1.6
-1.5
-1.2
-1.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.1
-1.2
-1.8
-1.2
-1.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.3
-1.0
-0.9
-1.0
-0.0
stress
ALP with nitrite 0.3 mM
+0.1
-1.2
-1.9
-1.2
-1.0
stress
ALP with perchlorate 3 mM
+0.1
-1.7
-1.2
-1.3
-1.1
stress
ALP with nitrate 50 mM
+0.1
-1.3
-1.5
-1.3
-1.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-2.2
-1.1
-0.9
-1.1
+0.1
stress
ALP with Zinc 2 mM
-0.1
-1.2
-1.5
-1.1
-1.2
carbon source
D,L-Lactate (C)
-0.0
-1.4
-1.7
-1.1
-0.9
stress
ALP with sodium fluoride 30 mM
-0.1
-1.2
-1.7
-1.0
-1.1
alp richb
ALP
-0.1
-1.3
-1.5
-1.0
-1.1
stress
ALP with nitrite 0.45 mM
+0.1
-1.2
-1.8
-1.1
-1.0
stress
ALP with Zinc 1 mM
+0.0
-1.2
-1.5
-1.2
-1.1
stress
ALP with Cisplatin 0.0008 mg/ml
+0.1
-1.2
-1.7
-1.0
-1.2
stress
ALP with Chloride 75 mM
+0.2
-1.4
-1.4
-1.4
-0.9
carbon source
L-Lactate (C)
-0.0
-1.3
-1.3
-1.2
-1.0
carbon source
D,L-Lactate (C)
+0.0
-1.3
-1.2
-1.3
-1.0
carbon source
L-Lactate (C)
-0.0
-1.2
-1.5
-1.1
-0.9
stress
ALP with sodium fluoride 40 mM
-0.0
-1.2
-1.4
-1.0
-1.0
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-3.2
-0.6
-0.4
-0.2
-0.3
carbon source
pyruvate (C)
-0.0
-1.4
-1.2
-1.2
-0.8
stress
ALP with nitrite 0.15 mM
+0.0
-1.3
-1.0
-1.1
-1.1
carbon source
D-Lactate (C)
+0.0
-1.3
-1.3
-1.1
-0.8
No stressor control+ 10 mM ClO4 and 20 mM lactate
-3.1
-0.4
-0.4
-0.0
-0.4
stress
ALP with Thallium(I) acetate 0.002 mg/ml
+0.2
-1.2
-1.1
-0.8
-1.1
stress
ALP with Bacitracin 0.2 mg/ml
+0.5
-1.4
-1.0
-1.1
-1.0
stress
ALP with Dimethyl Sulfoxide 2 vol%
+0.2
-1.2
-1.0
-1.0
-0.9
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