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Cofit
Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0153 and Dsui_0154 are separated by 92 nucleotides
Dsui_0154 and Dsui_0155 overlap by 4 nucleotides
Dsui_0155 and Dsui_0156 are separated by 171 nucleotides
Dsui_0156 and Dsui_0157 are separated by 10 nucleotides
Dsui_0153: Dsui_0153 - cupin domain-containing protein, at 160,150 to 160,503
_0153
Dsui_0154: Dsui_0154 - hypothetical protein, at 160,596 to 161,237
_0154
Dsui_0155: Dsui_0155 - RNA polymerase sigma factor, sigma-70 family, at 161,234 to 161,806
_0155
Dsui_0156: Dsui_0156 - thiosulfate reductase cytochrome B subunit (membrane anchoring protein), at 161,978 to 162,574
_0156
Dsui_0157: Dsui_0157 - sulfite oxidase-like oxidoreductase, at 162,585 to 163,373
_0157
Group
Condition
Dsui
_0153
Dsui
_0154
Dsui
_0155
Dsui
_0156
Dsui
_0157
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.1
-0.2
-3.1
-0.4
-0.4
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.1
+0.0
-3.2
-0.6
-0.4
No stressor control+ 10 mM ClO4 and 20 mM lactate
-2.1
-0.2
-3.1
-0.4
-0.3
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.9
-0.4
-2.3
-1.2
-1.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.9
-0.3
-2.3
-1.2
-1.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-1.9
-0.1
-3.0
-0.4
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.9
-0.3
-2.3
-1.0
-0.9
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-2.0
+0.2
-2.8
-0.4
-0.2
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.8
+0.3
-3.0
-0.4
-0.4
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.7
+0.1
-3.0
-0.2
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.7
-0.1
-2.2
-1.1
-0.9
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-1.1
-0.1
-3.1
-0.1
-0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.8
-0.0
-3.5
-0.2
-0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-1.2
+0.0
-2.2
-0.3
-0.2
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.5
-0.4
-1.6
-0.8
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.1
+0.4
-2.5
-0.0
+0.1
stress
ALP with Cisplatin 0.0009 mg/ml
+0.1
-0.0
-0.1
-1.2
-1.8
stress
ALP with perchlorate 6 mM
+0.1
+0.2
+0.0
-1.7
-1.6
stress
ALP with nitrite 0.45 mM
+0.1
-0.2
+0.1
-1.2
-1.8
stress
ALP with nitrite 0.3 mM
+0.1
-0.1
+0.1
-1.2
-1.9
stress
ALP with perchlorate 12 mM
+0.1
+0.2
+0.0
-1.6
-1.5
stress
ALP with perchlorate 3 mM
+0.1
+0.1
+0.1
-1.7
-1.2
stress
ALP with Cisplatin 0.0008 mg/ml
+0.2
+0.0
+0.1
-1.2
-1.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-1.3
+0.8
-2.4
+0.1
+0.2
stress
ALP with Chloride 75 mM
+0.2
-0.1
+0.2
-1.4
-1.4
stress
ALP with Bacitracin 0.2 mg/ml
+0.6
+0.6
+0.5
-1.4
-1.0
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.4
+0.7
-1.7
+0.4
+0.4
stress
ALP with Fusidic 0.02 mg/ml
+0.2
+1.7
+0.3
-1.2
-1.2
stress
ALP with Fusidic 0.01 mg/ml
+0.2
+1.7
+0.2
-1.3
-0.9
stress
ALP with Fusidic 0.007 mg/ml
+0.3
+1.6
+0.2
-1.3
-0.7
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