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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0044 and Dsui_0045 are separated by 6 nucleotides
Dsui_0045 and Dsui_0046 are separated by 34 nucleotides
Dsui_0046 and Dsui_0047 are separated by 111 nucleotides
Dsui_0047 and Dsui_0048 are separated by 165 nucleotides
Dsui_0044: Dsui_0044 - exodeoxyribonuclease III, at 40,231 to 41,004
_0044
Dsui_0045: Dsui_0045 - glutaredoxin-like protein, at 41,011 to 41,520
_0045
Dsui_0046: Dsui_0046 - Zn-dependent oligopeptidase, at 41,555 to 43,636
_0046
Dsui_0047: Dsui_0047 - putative integral membrane protein, at 43,748 to 44,518
_0047
Dsui_0048: Dsui_0048 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 44,684 to 45,622
_0048
Group
Condition
Dsui
_0044
Dsui
_0045
Dsui
_0046
Dsui
_0047
Dsui
_0048
stress
ALP with Cisplatin 0.0009 mg/ml
-2.4
-0.3
-0.8
-0.3
N.D.
stress
ALP with Cisplatin 0.0007 mg/ml
-2.0
-0.1
-0.6
-0.3
N.D.
stress
ALP with copper (II) chloride 0.6 mM
-1.4
+0.0
-0.7
-0.7
N.D.
stress
ALP with Cisplatin 0.0008 mg/ml
-1.5
-0.2
-0.6
-0.3
N.D.
stress
rich media with hydrogen peroxide 5 mM
-1.7
+0.3
-0.1
-0.1
N.D.
carbon source
D-Lactate (C)
-1.1
+0.1
+0.1
-0.4
N.D.
carbon source
R2A with sodium pyruvate
-1.2
+0.2
-0.1
+0.6
N.D.
stress
ALP with Bacitracin 0.2 mg/ml
-0.8
+0.2
+0.3
+0.2
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.8
+0.5
-0.3
+0.6
N.D.
alp rich
rich media
-0.6
+0.5
-0.1
+0.4
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
+0.8
-0.6
+0.6
N.D.
stress
rich media with sodium chlorite 0.16 mM
-0.7
+0.3
+0.2
+0.4
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
+0.4
-0.3
+0.7
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.4
+0.5
-0.4
+0.6
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.4
+0.4
-0.3
+0.7
N.D.
stress
ALP with Fusidic 0.02 mg/ml
-0.6
+0.0
+1.2
-0.1
N.D.
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.5
+0.6
-0.2
+0.5
N.D.
ALP with 3 all (C)s
+0.8
-0.5
+0.1
+0.1
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.2
+0.5
-0.3
+0.6
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.7
-0.3
+0.6
N.D.
stress
ALP with Fusidic 0.007 mg/ml
-0.4
-0.1
+1.1
+0.1
N.D.
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
+0.7
-0.2
+0.7
N.D.
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.1
+0.7
-0.2
+0.7
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.1
+0.8
-0.2
+0.7
N.D.
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
+0.9
-0.4
+0.6
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
+0.8
-0.4
+0.6
N.D.
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.0
+0.8
-0.2
+0.6
N.D.
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
+0.9
+0.1
+0.5
N.D.
stress
rich media with sodium chlorite 0.16 mM
+0.5
+0.4
+0.1
+0.5
N.D.
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
+0.9
-0.3
+0.7
N.D.
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