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Protein
Homologs
Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0008 and Dsui_0009 are separated by 0 nucleotides
Dsui_0009 and Dsui_0010 are separated by 107 nucleotides
Dsui_0010 and Dsui_0011 are separated by 417 nucleotides
Dsui_0011 and Dsui_0012 are separated by 221 nucleotides
Dsui_0008: Dsui_0008 - hypothetical protein, at 5,755 to 6,072
_0008
Dsui_0009: Dsui_0009 - ATP-dependent Clp protease ATP-binding subunit clpA, at 6,073 to 8,328
_0009
Dsui_0010: Dsui_0010 - RraA family protein, at 8,436 to 8,927
_0010
Dsui_0011: Dsui_0011 - isocitrate lyase, at 9,345 to 10,655
_0011
Dsui_0012: Dsui_0012 - putative permease, DMT superfamily, at 10,877 to 11,764
_0012
Group
Condition
Dsui
_0008
Dsui
_0009
Dsui
_0010
Dsui
_0011
Dsui
_0012
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.7
-7.3
+0.2
-0.2
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.6
-7.2
+0.4
-0.3
-0.0
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.8
-6.7
+0.2
-0.2
-0.1
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.4
-6.5
+0.4
-0.3
-0.2
No stressor control+ 10 mM ClO4 and 20 mM lactate
-0.7
-6.6
+0.4
-0.1
+0.1
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.7
-6.3
+0.4
-0.2
-0.0
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
-0.7
-6.1
+0.5
-0.1
-0.3
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-5.9
+0.3
-0.3
-0.1
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.5
-6.0
+0.4
-0.2
-0.3
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.2
-6.1
+0.3
-0.3
-0.1
stress
ALP with Cisplatin 0.0009 mg/ml
-0.3
-3.3
-0.7
-0.9
-0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
-0.7
-5.4
+0.6
-0.2
+0.0
carbon source
defined media with 40 mM sodium acetate
+0.1
-0.3
+0.1
-4.1
-0.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.0
-4.1
+0.1
-0.1
-0.1
stress
ALP with Cisplatin 0.0007 mg/ml
+0.2
-2.9
-0.4
-0.9
-0.2
carbon source
defined media with 40 mM sodium acetate
+0.0
-0.3
+0.3
-4.1
+0.0
carbon source
defined media with 40 mM sodium acetate
+0.0
-0.3
+0.1
-3.9
+0.1
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.5
-3.1
+0.3
-0.3
-0.2
carbon source
defined media with 40 mM sodium acetate
+0.2
-0.3
+0.0
-3.5
-0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.1
-3.7
-0.1
+0.0
-0.2
stress
ALP with Cisplatin 0.0008 mg/ml
+0.0
-2.8
-0.1
-0.6
-0.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.1
-3.7
+0.1
+0.0
+0.0
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
-3.9
+0.2
-0.2
+0.2
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.5
-3.4
+0.4
-0.1
+0.1
stress
ALP with Zinc 2 mM
-0.0
-0.8
-0.7
-1.2
-0.5
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
-0.7
-2.2
+0.2
-0.3
-0.0
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.4
+0.2
+0.1
-3.6
+0.1
stress
ALP with Nickel (II) chloride 2.5 mM
+0.3
-0.8
-1.0
-0.7
-0.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.3
+0.2
+0.0
-2.8
+0.0
anaerobic
Anaero. lactate (C), perchlorate electron acceptor
-0.3
-2.4
+0.4
+0.0
+0.2
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