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Fitness for 5 genes in
Dechlorosoma suillum PS
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Number of genes on each side:
1
2
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4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Dsui_0001 and Dsui_0002 are separated by 67 nucleotides
Dsui_0002 and Dsui_0003 are separated by 80 nucleotides
Dsui_0003 and Dsui_0004 are separated by 42 nucleotides
Dsui_0004 and Dsui_0005 are separated by 32 nucleotides
Dsui_0001: Dsui_0001 - aminodeoxychorismate synthase, component I, at 103 to 1,923
_0001
Dsui_0002: Dsui_0002 - putative redox protein, regulator of disulfide bond formation, at 1,991 to 2,218
_0002
Dsui_0003: Dsui_0003 - putative Zn-dependent protease, at 2,299 to 3,786
_0003
Dsui_0004: Dsui_0004 - molybdenum cofactor biosynthesis protein MoaC, at 3,829 to 4,323
_0004
Dsui_0005: Dsui_0005 - putative secreted protein, at 4,356 to 4,826
_0005
Group
Condition
Dsui
_0001
Dsui
_0002
Dsui
_0003
Dsui
_0004
Dsui
_0005
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.2
N.D.
-2.7
-10.6
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-4.3
-8.5
+0.7
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-4.4
-7.8
+0.3
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.3
N.D.
-2.6
-9.3
+0.6
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
N.D.
-4.0
-7.9
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.2
N.D.
-2.5
-8.9
+0.5
incubated with with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate for 3 hours
+0.1
N.D.
-2.8
-8.5
+0.6
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
N.D.
-3.1
-7.5
+0.5
spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.4
N.D.
-3.4
-7.0
+0.6
No stressor control+ 10 mM ClO4 and 20 mM lactate
+0.4
N.D.
-2.9
-7.2
+0.7
with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
+0.0
N.D.
-1.7
-7.2
+0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.4
N.D.
-1.3
-4.7
-0.6
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.6
N.D.
-1.5
-4.0
-0.8
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.4
N.D.
-1.8
-2.8
-1.1
anaerobic
Anaerobic growth in rich media with nitrate electron acceptor
-0.8
N.D.
-1.2
-3.0
-0.8
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
-0.1
N.D.
-2.2
-3.7
+0.4
stress
ALP with Zinc 2 mM
-0.3
N.D.
-4.5
-0.1
+0.0
stress
ALP with copper (II) chloride 0.6 mM
-0.7
N.D.
-3.7
+0.3
-0.4
anaerobic
anaerobic ALP with 3 all (C)s and 5mM perchlorate
+0.5
N.D.
-2.0
-3.5
+0.6
T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
+0.4
N.D.
-1.8
-3.6
+0.6
anaerobic
anaerobic no nitrogen ALP with 3 all (C)s and 5mM perchlorate
+0.1
N.D.
-1.2
-3.7
+0.5
stress
ALP with Bacitracin 0.2 mg/ml
-0.2
N.D.
-4.6
+0.5
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
N.D.
-0.4
-3.8
+0.2
anaerobic
Anaero. lactate (C), chlorate electron acceptor
+0.2
N.D.
-0.6
-3.8
+0.3
stress
ALP with Nickel (II) chloride 3.5 mM
-0.0
N.D.
-4.0
+0.0
+0.2
stress
ALP with Fusidic 0.02 mg/ml
+0.1
N.D.
-4.1
+0.2
+0.1
anaerobic
Anaero. lactate (C), chlorate electron acceptor
-0.1
N.D.
-0.1
-3.9
+0.3
stress
ALP with Fusidic 0.007 mg/ml
+0.2
N.D.
-4.1
+0.5
+0.1
stress
ALP with Cobalt chloride 0.25 mM
+0.1
N.D.
-3.9
+0.4
+0.4
stress
ALP with Nickel (II) chloride 2.5 mM
+0.2
N.D.
-4.1
+0.4
+0.5
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