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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_19220 and CSW01_19225 are separated by 152 nucleotides
CSW01_19225 and CSW01_19230 are separated by 204 nucleotides
CSW01_19230 and CSW01_19235 are separated by 419 nucleotides
CSW01_19235 and CSW01_19240 are separated by 134 nucleotides
CSW01_19220: CSW01_19220 - sel1 repeat family protein, at 971,546 to 972,703
_19220
CSW01_19225: CSW01_19225 - transcriptional regulator, at 972,856 to 973,692
_19225
CSW01_19230: CSW01_19230 - maltoporin, at 973,897 to 975,147
_19230
CSW01_19235: CSW01_19235 - glycogen debranching enzyme GlgX, at 975,567 to 977,537
_19235
CSW01_19240: CSW01_19240 - DUF2999 domain-containing protein, at 977,672 to 977,923
_19240
Group
Condition
CSW01
_19220
CSW01
_19225
CSW01
_19230
CSW01
_19235
CSW01
_19240
phage
ICP1_phage_0.23_MOI_rep1
-0.4
+0.2
+0.2
-0.0
-0.7
phage
NoPhageControl
-0.2
-0.1
+0.0
+0.0
-0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.4
-0.1
+0.1
-0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
-0.0
-0.2
+0.0
+0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.2
+0.2
+0.4
+0.2
-0.5
phage
ICP1_phage_2.3_MOI_rep2
-0.4
+0.0
+0.1
-0.2
+0.6
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.1
+0.3
-0.1
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.0
-0.1
-0.1
+0.1
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.2
-0.0
+0.0
+0.4
phage
ICP1_phage_2.3_MOI_rep1
+0.0
-0.2
+0.1
+0.1
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
-0.1
-0.0
+0.1
+0.5
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.1
+0.3
+0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.0
-0.2
+0.0
-0.0
+0.7
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
-0.1
-0.1
+0.0
+0.5
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.0
-0.1
-0.0
+0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.3
+0.1
+0.2
+0.1
+0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.2
-0.2
+0.3
+0.2
+0.4
phage
ICP3_phage_0.41_MOI_rep1
-0.1
+0.0
+0.4
+0.3
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
-0.0
-0.1
+0.0
+0.7
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
+0.1
-0.1
-0.0
+0.8
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.0
+0.0
-0.1
+0.1
+0.7
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.1
+0.3
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
+0.0
+0.1
+0.0
+0.5
phage
ICP3_phage_41.1_MOI_rep1
-0.1
+0.4
+0.2
+0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.1
-0.3
+0.2
+0.1
+0.8
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
-0.0
-0.1
+0.1
+0.8
phage
ICP3_phage_0.41_MOI_rep2
-0.0
+0.2
+0.3
+0.2
+0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.1
-0.1
+0.3
+0.1
+0.8
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.0
+0.0
+0.1
+0.9
phage
ICP3_phage_411_MOI_rep2
-0.2
-0.0
+0.1
+0.1
+1.3
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