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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_19115 and CSW01_19120 are separated by 151 nucleotides
CSW01_19120 and CSW01_19125 overlap by 4 nucleotides
CSW01_19125 and CSW01_19130 are separated by 51 nucleotides
CSW01_19130 and CSW01_19135 are separated by 115 nucleotides
CSW01_19115: CSW01_19115 - AraC family transcriptional regulator, at 953,320 to 954,153
_19115
CSW01_19120: CSW01_19120 - branched-chain amino acid ABC transporter permease, at 954,305 to 955,024
_19120
CSW01_19125: CSW01_19125 - branched-chain amino acid ABC transporter, at 955,021 to 955,338
_19125
CSW01_19130: CSW01_19130 - FAA hydrolase family protein, at 955,390 to 956,004
_19130
CSW01_19135: CSW01_19135 - MarR family transcriptional regulator, at 956,120 to 956,578
_19135
Group
Condition
CSW01
_19115
CSW01
_19120
CSW01
_19125
CSW01
_19130
CSW01
_19135
phage
ICP1_phage_2.3_MOI_rep2
-0.5
-0.0
-0.8
-0.6
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.4
+0.2
-1.5
+0.1
+0.3
phage
ICP1_phage_0.23_MOI_rep1
-0.4
+0.1
-0.2
-0.7
+0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.3
+0.2
-0.0
-0.5
-0.4
phage
ICP1_phage_23.5_MOI_rep1
-0.2
+0.1
-0.9
+0.2
-0.2
phage
ICP3_phage_41.1_MOI_rep1
-0.2
-0.2
-1.0
+0.3
+0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.4
+0.2
-0.9
+0.3
-0.2
phage
ICP3_phage_411_MOI_rep1
+0.0
+0.3
-1.3
+0.1
-0.0
phage
ICP3_phage_0.41_MOI_rep1
-0.3
+0.0
-0.7
-0.0
+0.2
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.2
-1.4
+0.2
+0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
+0.0
+0.3
-0.4
-0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
+0.4
-0.0
-0.2
-0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.4
+0.2
-0.9
+0.6
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.0
+0.8
-0.6
-0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.7
+0.5
-0.0
+0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
+0.2
+0.3
-0.3
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
+0.0
+0.4
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.3
-0.0
+0.6
-0.4
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.4
-0.8
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.2
+0.0
+0.6
-0.6
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
+0.1
+0.5
-0.3
-0.2
phage
ICP1_phage_2.3_MOI_rep1
-0.1
+0.2
-0.5
+0.3
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.1
+0.1
+0.4
-0.2
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
+0.2
+0.4
-0.5
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.2
+0.1
+0.7
-0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
+0.1
+0.6
-0.3
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
+0.1
+0.7
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.0
+0.2
+0.8
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.3
+0.4
+0.0
+0.4
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.0
+0.6
+0.2
+0.1
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