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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_18810 and CSW01_18815 overlap by 12 nucleotides
CSW01_18815 and CSW01_18820 are separated by 99 nucleotides
CSW01_18820 and CSW01_18825 are separated by 118 nucleotides
CSW01_18825 and CSW01_18830 are separated by 151 nucleotides
CSW01_18810: CSW01_18810 - DUF2817 domain-containing protein, at 885,605 to 886,543
_18810
CSW01_18815: CSW01_18815 - AraC family transcriptional regulator, at 886,532 to 887,323
_18815
CSW01_18820: CSW01_18820 - EamA/RhaT family transporter, at 887,423 to 888,322
_18820
CSW01_18825: CSW01_18825 - GGDEF domain-containing protein, at 888,441 to 889,406
_18825
CSW01_18830: CSW01_18830 - DeoR/GlpR family transcriptional regulator, at 889,558 to 890,319
_18830
Group
Condition
CSW01
_18810
CSW01
_18815
CSW01
_18820
CSW01
_18825
CSW01
_18830
phage
ICP1_phage_0.23_MOI_rep1
-0.4
-0.0
-0.1
-0.2
-0.9
phage
ICP3_phage_411_MOI_rep1
-0.2
-0.0
-0.3
-0.4
-0.6
phage
ICP3_phage_4.1_MOI_rep2
+0.0
-0.2
+0.1
+0.0
-1.1
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+0.3
-0.0
-0.3
-0.7
phage
ICP1_phage_235.3_MOI_rep1
-0.1
-0.2
+0.1
-0.1
-0.6
phage
ICP1_phage_0.23_MOI_rep2
-0.0
+0.2
+0.2
-0.2
-0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.1
-0.2
+0.3
-0.7
phage
ICP3_phage_41.1_MOI_rep2
+0.1
+0.1
-0.1
+0.3
-0.8
phage
ICP1_phage_2.3_MOI_rep1
+0.0
+0.2
+0.1
-0.0
-0.7
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.3
-0.0
-0.1
-0.6
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.5
+0.1
+0.0
-0.9
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
-0.2
-0.2
+0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
-0.1
+0.0
+0.1
-0.4
phage
NoPhageControl
+0.1
+0.0
+0.2
-0.1
-0.5
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
-0.2
-0.4
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
-0.2
-0.3
+0.2
-0.0
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.3
+0.0
-0.1
-0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.0
-0.2
+0.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
-0.2
-0.4
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.0
-0.2
-0.2
+0.2
-0.0
phage
ICP3_phage_0.41_MOI_rep1
+0.2
+0.4
+0.2
+0.0
-1.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.2
+0.0
-0.2
-0.0
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.4
+0.0
-0.2
+0.1
-0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.0
+0.2
+0.2
+0.2
-0.6
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.1
-0.0
-0.2
+0.3
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.0
+0.4
-0.0
-0.1
-0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.3
-0.1
-0.2
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.1
-0.2
+0.1
+0.3
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
+0.1
-0.1
+0.2
+0.2
phage
ICP3_phage_4.1_MOI_rep1
+0.0
+0.1
+0.4
+0.1
-0.2
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