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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_18665 and CSW01_18670 are separated by 158 nucleotides
CSW01_18670 and CSW01_18675 are separated by 140 nucleotides
CSW01_18675 and CSW01_18680 are separated by 301 nucleotides
CSW01_18680 and CSW01_18685 are separated by 24 nucleotides
CSW01_18665: CSW01_18665 - permease, at 856,342 to 857,694
_18665
CSW01_18670: CSW01_18670 - CdaR family transcriptional regulator, at 857,853 to 858,992
_18670
CSW01_18675: CSW01_18675 - methyl-accepting chemotaxis protein, at 859,133 to 860,869
_18675
CSW01_18680: CSW01_18680 - heme utilization protein HutZ, at 861,171 to 861,701
_18680
CSW01_18685: CSW01_18685 - heme utilization cystosolic carrier protein HutX, at 861,726 to 862,229
_18685
Group
Condition
CSW01
_18665
CSW01
_18670
CSW01
_18675
CSW01
_18680
CSW01
_18685
phage
ICP3_phage_411_MOI_rep2
-0.2
+0.3
+0.1
+0.3
-4.2
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.0
-0.1
+0.5
-1.6
phage
ICP3_phage_0.41_MOI_rep2
-0.4
+0.2
-0.2
-1.0
+0.5
phage
ICP1_phage_2.3_MOI_rep1
-0.2
-0.2
-0.4
+0.5
-0.6
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
+0.0
+0.2
+0.2
-0.8
phage
ICP1_phage_0.23_MOI_rep1
+0.0
+0.1
-0.0
-0.3
-0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.2
+0.2
+0.6
-1.2
phage
ICP3_phage_411_MOI_rep1
-0.3
+0.0
-0.6
+0.2
+0.4
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.1
+0.1
-0.2
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.2
+0.2
+0.3
+0.2
-0.2
phage
ICP1_phage_23.5_MOI_rep2
+0.1
+0.2
+0.3
+0.3
-0.2
phage
ICP3_phage_4.1_MOI_rep1
-0.2
+0.0
-0.0
+0.3
+0.7
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.1
+0.1
+0.0
+0.2
+0.5
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
+0.3
-0.0
+0.2
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.1
+0.2
+0.1
+0.3
+0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.0
+0.5
-0.5
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.1
+0.2
+0.1
+0.1
+0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.2
+0.2
+0.0
-0.1
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.0
+0.2
+0.3
-0.1
+0.6
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.3
+0.2
+0.0
+0.1
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.1
+0.1
+0.4
+0.4
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
+0.2
+0.2
+0.2
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
+0.0
+0.1
+0.3
+0.7
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.3
+0.4
+0.2
-0.3
+0.8
phage
ICP1_phage_0.23_MOI_rep2
-0.1
+0.0
+0.3
+0.8
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.2
+0.3
+0.1
+0.2
+0.6
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
+0.0
+0.4
-0.3
+1.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
+0.3
+0.2
-0.1
+1.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
+0.2
+0.3
+0.1
+1.0
phage
ICP1_phage_235.3_MOI_rep2
-0.1
+0.1
+0.5
-0.2
+1.6
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