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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_18570 and CSW01_18575 are separated by 189 nucleotides
CSW01_18575 and CSW01_18580 overlap by 20 nucleotides
CSW01_18580 and CSW01_18585 overlap by 23 nucleotides
CSW01_18585 and CSW01_18590 are separated by 99 nucleotides
CSW01_18570: CSW01_18570 - glycine C-acetyltransferase, at 837,112 to 838,305
_18570
CSW01_18575: CSW01_18575 - amidohydrolase, at 838,495 to 838,644
_18575
CSW01_18580: CSW01_18580 - protein deglycase HchA, at 838,625 to 839,484
_18580
CSW01_18585: CSW01_18585 - LuxR family transcriptional regulator, at 839,462 to 840,223
_18585
CSW01_18590: CSW01_18590 - LysR family transcriptional regulator, at 840,323 to 841,261
_18590
Group
Condition
CSW01
_18570
CSW01
_18575
CSW01
_18580
CSW01
_18585
CSW01
_18590
phage
ICP1_phage_2.3_MOI_rep1
-0.5
-0.1
+0.0
-0.4
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.3
-0.5
+0.0
-0.3
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+0.2
-0.2
+0.2
-1.2
phage
ICP3_phage_411_MOI_rep1
-0.5
-0.5
+0.1
-0.1
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
-0.6
+0.1
-0.2
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.6
-0.2
-0.1
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.4
-0.3
-0.0
-0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.6
-0.1
+0.0
-0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.5
-0.1
-0.1
+0.1
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.3
-0.1
-0.1
+0.0
-0.2
phage
ICP3_phage_41.1_MOI_rep2
-0.6
+0.1
-0.2
-0.0
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.2
-0.2
-0.1
+0.2
-0.3
phage
NoPhageControl
-0.1
+0.1
-0.2
+0.0
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.0
-0.3
+0.0
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.5
+0.3
-0.0
-0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.4
-0.0
+0.1
+0.1
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.2
+0.5
+0.3
+0.1
-1.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.4
-0.1
+0.1
-0.1
+0.4
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.3
-0.1
+0.3
-0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
-0.0
+0.1
-0.2
+0.2
phage
ICP1_phage_0.23_MOI_rep2
-0.0
+0.3
+0.1
-0.1
-0.4
phage
ICP3_phage_4.1_MOI_rep1
-0.5
+0.1
-0.1
+0.3
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.3
-0.1
+0.6
-0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.3
+0.1
+0.5
-0.4
phage
ICP3_phage_411_MOI_rep2
-0.1
+0.2
-0.2
+0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.3
+0.1
+0.1
+0.1
+0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.4
+0.2
+0.2
-0.1
+0.5
phage
ICP3_phage_0.41_MOI_rep2
-0.3
-0.1
+0.1
+0.1
+0.6
phage
ICP1_phage_0.23_MOI_rep1
-0.2
+0.4
-0.1
+0.1
+0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
-0.2
+0.4
+0.1
+0.2
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