Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_18475 and CSW01_18480 are separated by 234 nucleotidesCSW01_18480 and CSW01_18485 are separated by 128 nucleotidesCSW01_18485 and CSW01_18490 are separated by 12 nucleotidesCSW01_18490 and CSW01_18495 overlap by 53 nucleotides CSW01_18475: CSW01_18475 - D-alanyl-D-alanine endopeptidase, at 819,402 to 820,352 _18475 CSW01_18480: CSW01_18480 - PLP-dependent aminotransferase family protein, at 820,587 to 822,008 _18480 CSW01_18485: CSW01_18485 - cytochrome d terminal oxidase subunit 1, at 822,137 to 823,729 _18485 CSW01_18490: CSW01_18490 - cytochrome d ubiquinol oxidase subunit II, at 823,742 to 824,878 _18490 CSW01_18495: CSW01_18495 - cytochrome bd-I oxidase subunit CydX, at 824,826 to 824,990 _18495
Group Condition CSW01_18475 CSW01_18480 CSW01_18485 CSW01_18490 CSW01_18495
phage ICP3_phage_41.1_MOI_rep2 +0.4 -0.4 +0.1 +0.1 -2.7
phage ICP1_phage_2.3_MOI_rep1 +0.2 -0.6 -0.1 +0.1 -1.0
phage ICP1_phage_235.3_MOI_rep2 +0.3 -0.0 +0.2 +0.2 -2.0
phage ICP3_phage_4.1_MOI_rep1 +0.3 -0.5 -0.0 -0.0 -1.1
phage ICP1_phage_2.3_MOI_rep2 -0.0 -0.1 -0.3 -0.1 -0.5
phage ICP3_phage_411_MOI_rep2 -0.1 -0.1 -0.4 +0.1 -0.4
phage ICP3_phage_411_MOI_rep1 -0.1 -0.3 +0.0 -0.2 -0.3
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.0 +0.1 -0.2 -0.0 -0.5
lb_anaerobic LB_Anaerobic_60MIN_ZN4B -0.3 -0.1 +0.0 -0.0 -0.2
phage NoPhageControl -0.3 +0.0 -0.1 -0.0 -0.1
phage ICP1_phage_23.5_MOI_rep2 +0.5 -0.4 +0.1 +0.1 -0.9
phage ICP1_phage_235.3_MOI_rep1 +0.3 -0.1 -0.2 -0.2 -0.2
phage ICP1_phage_0.23_MOI_rep1 +0.1 -0.4 +0.2 +0.1 -0.3
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.3 +0.0 -0.3 -0.0 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B +0.2 +0.1 -0.2 -0.1 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A +0.2 +0.0 -0.2 +0.1 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.4 +0.2 -0.1 -0.1 -0.6
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.2 +0.2 +0.1 +0.1 -0.8
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.4 +0.0 -0.1 -0.0 -0.3
phage ICP3_phage_41.1_MOI_rep1 +0.6 -0.3 -0.1 +0.1 -0.3
phage ICP1_phage_0.23_MOI_rep2 +0.4 -0.1 -0.0 +0.1 -0.3
lb_aerobic LB_Aerobic_18HR_ZN18A +0.2 +0.1 -0.2 -0.2 +0.3
phage ICP3_phage_0.41_MOI_rep1 +0.5 -0.2 +0.1 -0.0 -0.1
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B +0.3 -0.1 -0.0 -0.1 +0.5
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.2 +0.2 -0.1 -0.1 +0.3
phage ICP3_phage_0.41_MOI_rep2 +0.5 -0.3 -0.0 -0.0 +0.5
phage ICP3_phage_4.1_MOI_rep2 +0.5 -0.3 +0.2 +0.1 +0.2
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.2 +0.2 +0.2 -0.1 +0.2
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.3 +0.1 +0.2 -0.1 +0.4
phage ICP1_phage_23.5_MOI_rep1 +0.3 -0.2 -0.0 +0.0 +0.8
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