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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_18010 and CSW01_18015 are separated by 103 nucleotides
CSW01_18015 and CSW01_18020 are separated by 99 nucleotides
CSW01_18020 and CSW01_18025 are separated by 36 nucleotides
CSW01_18025 and CSW01_18030 are separated by 36 nucleotides
CSW01_18010: CSW01_18010 - cytochrome C554, at 708,387 to 708,695
_18010
CSW01_18015: CSW01_18015 - TetR/AcrR family transcriptional regulator, at 708,799 to 709,533
_18015
CSW01_18020: CSW01_18020 - DEAD/DEAH box helicase, at 709,633 to 710,901
_18020
CSW01_18025: CSW01_18025 - ACP phosphodiesterase, at 710,938 to 711,519
_18025
CSW01_18030: CSW01_18030 - hypothetical protein, at 711,556 to 711,675
_18030
Group
Condition
CSW01
_18010
CSW01
_18015
CSW01
_18020
CSW01
_18025
CSW01
_18030
phage
ICP3_phage_411_MOI_rep2
-2.7
-0.2
+0.5
-0.4
-0.2
phage
ICP3_phage_0.41_MOI_rep2
-1.1
+0.1
+0.4
-0.2
-0.7
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.1
+0.4
-0.3
-1.0
phage
ICP1_phage_0.23_MOI_rep1
-0.6
-0.6
+0.8
+0.0
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.3
-0.4
+0.3
+0.0
-0.5
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.0
+0.2
-0.2
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.6
-0.2
+0.2
-0.2
-0.6
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.4
-0.3
+0.2
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.4
-0.3
+0.2
+0.1
-0.4
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.6
-0.1
-0.1
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.3
-0.0
+0.3
-0.2
-0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-0.2
+0.7
+0.0
-0.3
phage
ICP3_phage_41.1_MOI_rep1
-0.2
+0.0
+0.5
-0.6
+0.5
phage
ICP1_phage_235.3_MOI_rep1
+0.1
-0.4
+0.8
+0.1
-0.3
phage
ICP3_phage_411_MOI_rep1
+0.3
-0.1
+0.4
-0.3
+0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.3
+0.1
+1.0
-0.5
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.4
-0.0
+0.5
-0.0
-0.5
phage
ICP3_phage_4.1_MOI_rep1
+0.4
+0.1
+0.6
-0.2
-0.5
phage
ICP1_phage_0.23_MOI_rep2
+0.7
-0.5
+0.7
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
+0.1
+0.3
-0.2
+0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.4
-0.2
+0.3
+0.1
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.2
-0.2
+0.5
-0.2
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.4
-0.1
+0.4
-0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.8
-0.1
+0.1
-0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep2
-0.4
+0.2
+1.0
+0.2
-0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.2
+0.2
+0.5
-0.1
+0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.3
+0.2
+0.9
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.6
-0.1
+0.1
+0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.6
-0.4
+0.9
-0.2
+0.5
phage
ICP1_phage_2.3_MOI_rep2
+0.2
+0.2
+0.7
-0.3
+0.8
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