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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_17855 and CSW01_17860 are separated by 17 nucleotides
CSW01_17860 and CSW01_17865 are separated by 211 nucleotides
CSW01_17865 and CSW01_17870 are separated by 101 nucleotides
CSW01_17870 and CSW01_17875 are separated by 16 nucleotides
CSW01_17855: CSW01_17855 - autoinducer 2 sensor kinase/phosphatase LuxQ, at 678,655 to 681,228
_17855
CSW01_17860: CSW01_17860 - autoinducer 2-binding periplasmic protein LuxP, at 681,246 to 682,340
_17860
CSW01_17865: CSW01_17865 - conjugal transfer protein TraF, at 682,552 to 683,712
_17865
CSW01_17870: CSW01_17870 - GIY-YIG nuclease family protein, at 683,814 to 684,119
_17870
CSW01_17875: CSW01_17875 - DUF480 domain-containing protein, at 684,136 to 684,786
_17875
Group
Condition
CSW01
_17855
CSW01
_17860
CSW01
_17865
CSW01
_17870
CSW01
_17875
phage
ICP1_phage_0.23_MOI_rep1
-0.4
-0.4
-0.3
-0.5
-0.2
phage
ICP1_phage_23.5_MOI_rep1
-0.3
-0.3
-0.0
-0.5
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.8
+0.1
-0.0
-0.4
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-1.3
+0.2
+0.1
-0.1
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.8
+0.1
+0.0
-0.4
+0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.6
-0.0
-0.1
-0.3
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.2
-0.3
-0.0
-0.1
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.9
-0.0
-0.0
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.9
+0.1
+0.1
-0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-1.2
+0.0
+0.1
+0.2
-0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-1.0
+0.0
+0.0
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
-0.8
-0.2
-0.0
+0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.6
+0.1
-0.0
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.7
+0.1
-0.0
+0.1
-0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.4
+0.1
+0.1
-0.1
-0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.7
+0.1
-0.0
-0.0
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.5
+0.3
+0.0
-0.4
-0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.2
-0.1
+0.1
+0.3
-0.7
phage
ICP1_phage_23.5_MOI_rep2
-0.3
+0.1
+0.1
-0.1
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.3
+0.2
+0.0
-0.2
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.4
+0.5
-0.1
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.5
+0.3
+0.1
-0.2
-0.0
phage
ICP3_phage_41.1_MOI_rep2
-0.2
-0.4
+0.0
+0.2
+0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.3
-0.4
-0.4
+0.8
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.5
+0.2
+0.1
+0.1
-0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.3
+0.3
+0.1
-0.3
-0.0
phage
ICP1_phage_235.3_MOI_rep1
-0.0
-0.4
+0.4
+0.2
-0.0
phage
ICP1_phage_2.3_MOI_rep1
-0.1
-0.3
+0.0
+0.7
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
+0.3
+0.1
+0.0
+0.3
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.3
+0.2
+0.9
-0.1
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