Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_17545 and CSW01_17550 are separated by 96 nucleotidesCSW01_17550 and CSW01_17555 are separated by 239 nucleotidesCSW01_17555 and CSW01_17560 are separated by 50 nucleotidesCSW01_17560 and CSW01_17565 overlap by 11 nucleotides CSW01_17545: CSW01_17545 - MFS transporter, at 603,632 to 604,927 _17545 CSW01_17550: CSW01_17550 - nuclear transport factor 2 family protein, at 605,024 to 606,040 _17550 CSW01_17555: CSW01_17555 - LacI family transcriptional regulator, at 606,280 to 607,311 _17555 CSW01_17560: CSW01_17560 - DNA-binding response regulator, at 607,362 to 607,988 _17560 CSW01_17565: CSW01_17565 - nitrate/nitrite two-component system sensor histidine kinase NarQ, at 607,978 to 609,729 _17565
Group Condition CSW01_17545 CSW01_17550 CSW01_17555 CSW01_17560 CSW01_17565
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 -0.1 -0.4 -0.2 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A +0.0 -0.2 -0.5 -0.1 -0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19A +0.0 -0.1 -0.5 -0.1 -0.1
phage ICP1_phage_0.23_MOI_rep1 -0.1 -0.2 +0.1 -0.5 -0.1
phage ICP3_phage_4.1_MOI_rep1 +0.2 -0.1 -0.5 -0.2 -0.2
lb_anaerobic LB_Anaerobic_18HR_ZN20A +0.1 -0.2 -0.2 -0.2 -0.1
lb_aerobic LB_Aerobic_18HR_ZN18B +0.2 -0.1 -0.4 -0.2 -0.2
lb_anaerobic LB_Anaerobic_180MIN_ZN16A -0.1 -0.1 -0.2 -0.2 -0.1
phage ICP1_phage_2.3_MOI_rep1 -0.2 +0.0 -0.1 -0.1 -0.3
lb_anaerobic LB_Anaerobic_18HR_ZN20B +0.1 -0.3 -0.2 -0.2 -0.1
phage ICP3_phage_0.41_MOI_rep1 -0.2 -0.1 +0.0 -0.4 +0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A +0.3 -0.3 -0.0 -0.3 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15B +0.2 -0.2 -0.2 -0.2 -0.0
lb_aerobic LB_Aerobic_120MIN_ZN10B +0.2 -0.2 -0.2 -0.3 +0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B +0.2 -0.1 -0.4 +0.0 -0.1
lb_anaerobic LB_Anaerobic_120MIN_ZN12A +0.1 -0.1 -0.4 +0.0 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.0 -0.3 +0.1 -0.1 -0.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.2 -0.1 -0.2 -0.1 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B +0.1 -0.1 -0.2 -0.2 +0.1
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.2 -0.2 +0.2 +0.1 -0.1
phage ICP3_phage_0.41_MOI_rep2 +0.4 -0.2 -0.5 +0.0 +0.2
phage ICP1_phage_23.5_MOI_rep1 -0.2 -0.5 +0.4 +0.2 -0.0
phage ICP1_phage_23.5_MOI_rep2 +0.4 -0.5 -0.3 +0.1 +0.3
phage NoPhageControl +0.1 -0.2 -0.1 -0.0 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_18HR_ZN19B +0.3 -0.1 +0.1 -0.2 -0.1
phage ICP3_phage_411_MOI_rep2 +0.1 -0.2 -0.0 +0.2 +0.2
phage ICP3_phage_41.1_MOI_rep1 +0.2 +0.2 -0.2 -0.1 +0.1
phage ICP1_phage_235.3_MOI_rep1 -0.2 +0.0 +0.6 +0.0 -0.0
phage ICP1_phage_235.3_MOI_rep2 +0.1 +0.1 +0.5 +0.1 -0.0
phage ICP3_phage_411_MOI_rep1 +0.2 +0.1 +0.2 -0.0 +0.2
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CSW01_17545
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CSW01_17550
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CSW01_17560
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CSW01_17565
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