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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_17390 and CSW01_17395 are separated by 18 nucleotides
CSW01_17395 and CSW01_17400 overlap by 4 nucleotides
CSW01_17400 and CSW01_17405 overlap by 44 nucleotides
CSW01_17405 and CSW01_17410 are separated by 109 nucleotides
CSW01_17390: CSW01_17390 - oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB, at 570,004 to 570,657
_17390
CSW01_17395: CSW01_17395 - hypothetical protein, at 570,676 to 570,876
_17395
CSW01_17400: CSW01_17400 - AcrB/AcrD/AcrF family protein, at 570,873 to 574,076
_17400
CSW01_17405: CSW01_17405 - efflux RND transporter periplasmic adaptor subunit, at 574,033 to 575,037
_17405
CSW01_17410: CSW01_17410 - transporter, at 575,147 to 575,611
_17410
Group
Condition
CSW01
_17390
CSW01
_17395
CSW01
_17400
CSW01
_17405
CSW01
_17410
phage
ICP3_phage_0.41_MOI_rep2
-0.6
-0.5
+0.1
-0.3
+0.5
phage
ICP1_phage_2.3_MOI_rep1
-0.3
-0.6
+0.1
-0.2
+0.4
phage
ICP1_phage_0.23_MOI_rep1
-0.5
-0.7
-0.2
-0.0
+0.6
phage
ICP1_phage_235.3_MOI_rep1
-0.7
-0.4
-0.1
-0.2
+0.7
phage
ICP3_phage_0.41_MOI_rep1
+0.2
-0.4
+0.0
-0.1
-0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.5
-0.0
-0.0
+0.3
phage
ICP1_phage_2.3_MOI_rep2
-0.2
-0.5
-0.1
-0.0
+0.5
phage
ICP3_phage_4.1_MOI_rep2
+0.0
-1.0
+0.1
-0.1
+0.7
phage
ICP3_phage_411_MOI_rep1
+0.2
-0.7
-0.0
-0.3
+0.6
phage
ICP3_phage_4.1_MOI_rep1
-0.6
-0.1
+0.0
-0.0
+0.4
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.2
+0.0
+0.1
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.6
-0.2
+0.2
-0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.4
+0.3
-0.0
+0.0
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
+0.6
-0.1
+0.1
-0.4
phage
ICP1_phage_23.5_MOI_rep1
-0.3
+0.0
+0.2
-0.1
+0.5
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.0
+0.7
-0.2
-0.0
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.1
+0.8
+0.0
-0.0
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.5
-0.2
+0.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.2
+0.5
-0.0
+0.1
-0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.1
+0.8
-0.1
+0.2
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
+0.6
-0.0
+0.1
-0.2
phage
ICP1_phage_235.3_MOI_rep2
+0.1
-0.4
+0.1
+0.2
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
+0.8
-0.0
+0.2
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.0
+0.6
-0.0
+0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.8
-0.2
-0.1
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.3
+0.6
-0.0
+0.1
-0.0
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.7
+0.0
-0.3
+0.6
phage
ICP3_phage_41.1_MOI_rep1
+0.2
+0.0
+0.1
+0.1
+0.7
phage
ICP1_phage_0.23_MOI_rep2
+0.5
+0.2
+0.0
-0.3
+0.7
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
+0.8
-0.2
+0.2
+0.6
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