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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_17240 and CSW01_17245 are separated by 17 nucleotides
CSW01_17245 and CSW01_17250 are separated by 6 nucleotides
CSW01_17250 and CSW01_17255 are separated by 164 nucleotides
CSW01_17255 and CSW01_17260 are separated by 60 nucleotides
CSW01_17240: CSW01_17240 - 2-aminoethylphosphonate--pyruvate aminotransferase, at 539,669 to 540,772
_17240
CSW01_17245: CSW01_17245 - aspartate aminotransferase family protein, at 540,790 to 542,187
_17245
CSW01_17250: CSW01_17250 - phosphonoacetaldehyde hydrolase, at 542,194 to 543,009
_17250
CSW01_17255: CSW01_17255 - nucleoside diphosphate kinase regulator, at 543,174 to 543,581
_17255
CSW01_17260: CSW01_17260 - noncanonical pyrimidine nucleotidase, YjjG family, at 543,642 to 544,316
_17260
Group
Condition
CSW01
_17240
CSW01
_17245
CSW01
_17250
CSW01
_17255
CSW01
_17260
phage
ICP1_phage_2.3_MOI_rep1
-0.3
+0.0
-0.3
-1.0
+0.0
phage
ICP1_phage_0.23_MOI_rep1
-0.3
-0.2
-0.7
-0.3
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
-0.1
-0.0
-1.0
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.3
+0.1
-0.2
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
+0.0
-0.1
-0.3
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
-0.0
+0.2
-0.4
+0.0
phage
ICP3_phage_411_MOI_rep2
-0.1
-0.1
-0.0
+0.4
-0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.1
+0.2
+0.1
-0.5
-0.1
phage
ICP3_phage_41.1_MOI_rep1
+0.4
+0.0
-0.4
-0.6
+0.6
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.1
+0.0
+0.1
-0.5
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.1
+0.1
+0.3
-0.3
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.1
+0.2
+0.0
-0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.0
+0.1
+0.2
-0.4
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
+0.0
+0.0
-0.2
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
+0.3
+0.1
-0.4
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.0
+0.2
+0.1
-0.2
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.2
+0.1
-0.3
+0.4
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.0
+0.2
+0.3
-0.3
+0.3
phage
ICP1_phage_0.23_MOI_rep2
-0.3
-0.1
+0.1
+0.6
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.0
+0.0
+0.1
-0.2
+0.5
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.1
-0.0
+0.0
+0.4
phage
ICP1_phage_23.5_MOI_rep2
-0.1
+0.0
+0.0
+0.5
+0.3
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.0
+0.1
+0.0
+0.1
+0.6
phage
ICP3_phage_0.41_MOI_rep2
-0.1
-0.2
+0.3
+0.5
+0.3
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.2
+0.2
+0.3
+0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.3
-0.2
+0.6
+1.0
phage
ICP1_phage_23.5_MOI_rep1
+0.0
+0.1
+0.0
+0.3
+0.8
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.1
-0.2
+0.9
+0.6
phage
ICP1_phage_235.3_MOI_rep1
-0.0
+0.0
+0.2
+1.1
+0.2
phage
ICP3_phage_411_MOI_rep1
-0.1
+0.3
-0.2
+0.8
+1.0
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