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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_17220 and CSW01_17225 are separated by 24 nucleotides
CSW01_17225 and CSW01_17230 overlap by 68 nucleotides
CSW01_17230 and CSW01_17235 are separated by 155 nucleotides
CSW01_17235 and CSW01_17240 are separated by 231 nucleotides
CSW01_17220: CSW01_17220 - phosphonate utilization transcriptional regulator PhnR, at 534,611 to 535,315
_17220
CSW01_17225: CSW01_17225 - putative 2-aminoethylphosphonate ABC transporter permease subunit, at 535,340 to 537,118
_17225
CSW01_17230: CSW01_17230 - putative 2-aminoethylphosphonate ABC transporter ATP-binding protein, at 537,051 to 538,262
_17230
CSW01_17235: CSW01_17235 - putative 2-aminoethylphosphonate ABC transporter substrate-binding protein, at 538,418 to 539,437
_17235
CSW01_17240: CSW01_17240 - 2-aminoethylphosphonate--pyruvate aminotransferase, at 539,669 to 540,772
_17240
Group
Condition
CSW01
_17220
CSW01
_17225
CSW01
_17230
CSW01
_17235
CSW01
_17240
phage
ICP1_phage_2.3_MOI_rep1
-0.6
-0.1
-1.0
+0.1
-0.3
phage
ICP3_phage_411_MOI_rep2
-0.7
+0.1
-0.3
-0.1
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.6
+0.0
-0.3
+0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.5
+0.0
-0.4
-0.4
-0.3
phage
ICP1_phage_0.23_MOI_rep1
-0.1
+0.0
-0.4
+0.2
-0.3
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.0
-0.1
-0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
-0.0
+0.2
-0.4
-0.2
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
-0.0
-0.3
-0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.3
+0.1
-0.0
-0.1
-0.0
phage
ICP3_phage_0.41_MOI_rep2
-0.3
+0.1
-0.0
+0.0
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.2
-0.1
-0.0
+0.2
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.3
-0.0
-0.0
+0.2
-0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.5
+0.1
-0.1
+0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.1
+0.1
-0.3
+0.1
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.2
-0.1
-0.1
-0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.1
+0.2
+0.0
-0.3
-0.3
phage
ICP3_phage_4.1_MOI_rep2
+0.2
-0.1
-0.1
-0.0
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.1
+0.1
-0.2
+0.1
-0.0
phage
NoPhageControl
-0.2
+0.0
+0.1
+0.1
-0.1
phage
ICP1_phage_23.5_MOI_rep1
-0.1
+0.0
-0.1
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.1
-0.2
+0.3
+0.0
-0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.3
+0.2
-0.2
-0.2
+0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.2
-0.1
+0.2
-0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.2
-0.1
+0.1
+0.1
-0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.2
+0.2
+0.1
-0.2
+0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.3
-0.1
+0.1
-0.0
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.2
-0.1
+0.2
+0.0
+0.0
phage
ICP3_phage_411_MOI_rep1
+0.1
+0.1
+0.0
+0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
-0.0
+0.1
+0.2
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.2
+0.1
+0.0
+0.2
-0.0
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