Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 45 experiments or choose conditions or try the comparative fitness browser

500 ntCSW01_17040 and CSW01_17045 are separated by 11 nucleotidesCSW01_17045 and CSW01_17050 are separated by 100 nucleotidesCSW01_17050 and CSW01_17055 overlap by 26 nucleotidesCSW01_17055 and CSW01_17060 overlap by 4 nucleotides CSW01_17040: CSW01_17040 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha, at 498,408 to 499,946 _17040 CSW01_17045: CSW01_17045 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 499,958 to 501,334 _17045 CSW01_17050: CSW01_17050 - histidine kinase, at 501,435 to 502,934 _17050 CSW01_17055: CSW01_17055 - DNA-binding response regulator, at 502,909 to 503,565 _17055 CSW01_17060: CSW01_17060 - DUF2861 domain-containing protein, at 503,562 to 504,452 _17060
Group Condition CSW01_17040 CSW01_17045 CSW01_17050 CSW01_17055 CSW01_17060
phage ICP1_phage_23.5_MOI_rep1 +0.0 -0.4 +0.5 -0.7 -0.9
lb_anaerobic LB_Anaerobic_18HR_ZN20A -0.1 -0.3 -0.1 -0.2 -0.4
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B +0.1 -0.3 -0.1 -0.4 -0.2
phage ICP3_phage_41.1_MOI_rep2 -0.4 -0.5 +0.7 +0.7 -1.4
phage NoPhageControl -0.1 -0.2 +0.1 -0.0 -0.6
phage NoPhageControl +0.1 -0.1 +0.1 -0.1 -0.5
lb_aerobic LB_Aerobic_18HR_ZN18A -0.2 -0.1 +0.2 +0.3 -0.3
phage ICP3_phage_0.41_MOI_rep2 +0.2 -0.1 +0.5 +0.0 -0.8
phage ICP3_phage_4.1_MOI_rep2 -0.1 -0.6 +0.7 +0.4 -0.4
phage ICP1_phage_2.3_MOI_rep1 +0.1 -0.1 +0.4 +0.3 -0.7
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_18HR_ZN21A -0.2 -0.1 +0.4 +0.1 -0.3
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A +0.3 -0.0 +0.2 +0.1 -0.4
phage ICP1_phage_235.3_MOI_rep1 +0.1 -0.2 +0.6 +0.6 -0.8
phage ICP3_phage_41.1_MOI_rep1 +0.2 -0.7 +0.8 +0.9 -0.8
phage ICP3_phage_411_MOI_rep1 +0.2 -0.2 +0.7 +0.6 -1.0
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A +0.2 -0.3 +0.4 +0.3 -0.2
lb_anaerobic LB_Anaerobic_120MIN_ZN12B -0.1 -0.3 +0.4 +0.4 +0.0
phage ICP3_phage_0.41_MOI_rep1 -0.0 -0.1 +0.6 +1.0 -1.0
phage ICP3_phage_411_MOI_rep2 +0.0 -0.4 +0.7 +0.8 -0.8
phage ICP1_phage_0.23_MOI_rep2 +0.2 -0.4 +0.2 +0.3 +0.2
lb_aerobic LB_Aerobic_120MIN_ZN10B +0.1 -0.3 +0.3 +0.2 +0.3
phage ICP3_phage_4.1_MOI_rep1 +0.2 -0.2 +0.4 +0.6 -0.4
lb_anaerobic LB_Anaerobic_180MIN_ZN16B +0.1 -0.3 +0.4 +0.4 +0.1
phage ICP1_phage_2.3_MOI_rep2 +0.3 -0.0 +0.6 +0.6 -0.9
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A +0.1 -0.1 +0.4 +0.4 -0.0
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11A -0.0 -0.0 +0.3 +0.5 -0.0
phage ICP1_phage_235.3_MOI_rep2 +0.3 -0.0 +0.4 +0.8 -0.7
phage ICP1_phage_0.23_MOI_rep1 +0.2 +0.5 +0.5 -0.0 -0.2
lb_aerobic LB_Aerobic_60MIN_ZN2B -0.1 +0.2 +0.4 +0.6 -0.0
phage ICP1_phage_23.5_MOI_rep2 +0.5 +0.0 +0.9 +0.7 -0.5
remove
CSW01_17040
plot		 remove
CSW01_17045
plot		 remove
CSW01_17050		 remove
CSW01_17055
plot		 remove
CSW01_17060
plot