Fitness for 5 genes in Vibrio cholerae E7946 ATCC 55056

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500 ntCSW01_16875 and CSW01_16880 are separated by 322 nucleotidesCSW01_16880 and CSW01_16885 are separated by 97 nucleotidesCSW01_16885 and CSW01_16890 are separated by 102 nucleotidesCSW01_16890 and CSW01_16895 overlap by 11 nucleotides CSW01_16875: CSW01_16875 - ribosome biogenesis GTPase YlqF, at 460,605 to 461,549 _16875 CSW01_16880: CSW01_16880 - potassium transporter Kup, at 461,872 to 463,734 _16880 CSW01_16885: CSW01_16885 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 463,832 to 467,071 _16885 CSW01_16890: CSW01_16890 - sensor histidine kinase KdpD, at 467,174 to 468,667 _16890 CSW01_16895: CSW01_16895 - DNA-binding response regulator, at 468,657 to 469,349 _16895
Group Condition CSW01_16875 CSW01_16880 CSW01_16885 CSW01_16890 CSW01_16895
phage ICP3_phage_0.41_MOI_rep2 N.D. +0.1 +0.2 -0.4 -1.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5A N.D. -0.4 +0.0 +0.0 -0.3
phage ICP1_phage_0.23_MOI_rep1 N.D. +0.0 +0.1 -0.5 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_60MIN_ZN5B N.D. -0.1 +0.0 +0.2 -0.6
phage ICP1_phage_235.3_MOI_rep2 N.D. +0.1 -0.0 -0.2 -0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17A N.D. +0.0 +0.0 +0.1 -0.5
phage ICP3_phage_4.1_MOI_rep1 N.D. +0.1 +0.2 -0.7 +0.3
phage NoPhageControl N.D. +0.2 -0.1 -0.0 -0.3
phage ICP1_phage_2.3_MOI_rep1 N.D. +0.1 +0.0 -0.3 +0.1
phage NoPhageControl N.D. +0.2 -0.0 +0.1 -0.3
phage ICP3_phage_411_MOI_rep2 N.D. +0.4 +0.2 -0.4 -0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_180MIN_ZN15A N.D. +0.1 +0.1 +0.1 -0.2
phage ICP1_phage_235.3_MOI_rep1 N.D. +0.4 -0.0 -0.4 +0.3
phage ICP1_phage_0.23_MOI_rep2 N.D. +0.3 +0.3 -0.2 +0.1
phage ICP1_phage_23.5_MOI_rep1 N.D. +0.4 +0.4 +0.1 -0.4
lb_aerobic LB_Aerobic_18HR_ZN18B N.D. +0.1 +0.2 +0.3 -0.1
lb_aerobic LB_Aerobic_180MIN_ZN14B N.D. -0.0 +0.3 +0.4 -0.1
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_120MIN_ZN13A N.D. -0.0 +0.2 +0.3 +0.1
phage ICP3_phage_411_MOI_rep1 N.D. -0.0 +0.2 -0.1 +0.5
lb_anaerobic LB_Anaerobic_180MIN_ZN16A N.D. +0.2 +0.1 +0.3 -0.1
lb_aerobic LB_Aerobic_120MIN_ZN10B N.D. +0.0 +0.1 +0.2 +0.2
lb_0.5%bileacids_anaerobic LB_0.5%bileacids_Anaerobic_180MIN_ZN17B N.D. +0.2 +0.3 +0.1 +0.1
lb_aerobic LB_Aerobic_180MIN_ZN14A N.D. +0.0 +0.2 +0.2 +0.2
lb_0.5%bileacids_aerobic LB_0.5%bileacids_aerobic_120MIN_ZN11B N.D. +0.2 +0.2 +0.4 -0.1
phage ICP3_phage_0.41_MOI_rep1 N.D. -0.1 +0.2 -0.2 +0.8
lb_aerobic_phage LB_Aerobic_PHAGE INFX20MPI_ZN6A N.D. +0.1 +0.2 +0.1 +0.3
phage ICP3_phage_41.1_MOI_rep1 N.D. -0.0 +0.1 +0.2 +0.6
phage ICP3_phage_4.1_MOI_rep2 N.D. +0.1 +0.2 -0.0 +0.7
phage ICP1_phage_2.3_MOI_rep2 N.D. +0.3 +0.2 -0.2 +0.9
phage ICP1_phage_23.5_MOI_rep2 N.D. +0.3 +0.1 +0.3 +0.7
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CSW01_16875
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CSW01_16880
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CSW01_16895
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