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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_16820 and CSW01_16825 are separated by 12 nucleotides
CSW01_16825 and CSW01_16830 are separated by 10 nucleotides
CSW01_16830 and CSW01_16835 are separated by 338 nucleotides
CSW01_16835 and CSW01_16840 are separated by 53 nucleotides
CSW01_16820: CSW01_16820 - PTS fructose transporter subunit IIBC, at 443,342 to 445,084
_16820
CSW01_16825: CSW01_16825 - 1-phosphofructokinase, at 445,097 to 446,050
_16825
CSW01_16830: CSW01_16830 - bifunctional PTS fructose transporter subunit IIA/HPr protein, at 446,061 to 447,263
_16830
CSW01_16835: CSW01_16835 - catabolite repressor/activator, at 447,602 to 448,582
_16835
CSW01_16840: CSW01_16840 - exonuclease sbcCD subunit D, at 448,636 to 449,775
_16840
Group
Condition
CSW01
_16820
CSW01
_16825
CSW01
_16830
CSW01
_16835
CSW01
_16840
phage
ICP3_phage_411_MOI_rep1
-0.0
-0.3
-0.0
-1.8
-0.2
phage
ICP1_phage_2.3_MOI_rep2
+0.2
-0.6
-0.1
-1.4
-0.4
phage
ICP1_phage_2.3_MOI_rep1
-0.0
+0.1
-0.1
-1.8
-0.4
phage
ICP3_phage_41.1_MOI_rep2
+0.1
-0.6
-0.2
-1.0
-0.3
phage
ICP3_phage_411_MOI_rep2
+0.1
-0.3
-0.1
-1.3
-0.3
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.0
-0.5
-1.1
-0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.0
-0.2
-0.0
-1.6
-0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.5
-0.1
-1.4
+0.3
phage
ICP1_phage_23.5_MOI_rep1
-0.0
-0.1
-0.3
-1.4
+0.3
phage
ICP1_phage_235.3_MOI_rep1
+0.4
-0.7
+0.1
-1.5
+0.3
phage
ICP1_phage_23.5_MOI_rep2
+0.1
-0.4
-0.1
-0.8
-0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.1
-0.6
+0.1
-1.2
+0.3
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.7
+0.3
-1.3
+0.4
phage
ICP1_phage_0.23_MOI_rep2
+0.0
-0.1
-0.1
-1.1
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.2
-0.3
+0.1
-1.0
-0.0
phage
ICP3_phage_41.1_MOI_rep1
+0.4
-0.4
+0.1
-1.1
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.0
+0.3
+0.1
-0.6
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
+0.1
-0.0
-0.3
-0.4
phage
NoPhageControl
-0.2
-0.1
-0.0
-0.4
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.2
+0.2
-0.1
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.0
-0.1
-0.1
+0.2
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
-0.0
+0.2
-0.1
-0.3
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.1
+0.1
-0.2
-0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.1
+0.1
+0.1
-0.4
-0.0
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.0
+0.3
-0.0
-0.3
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
+0.1
-0.1
-0.3
+0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.0
+0.2
+0.1
-0.2
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.1
+0.2
+0.1
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.0
+0.4
+0.1
+0.0
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
+0.1
+0.1
-0.0
+0.3
-0.0
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CSW01_16830
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