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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_16715 and CSW01_16720 are separated by 63 nucleotides
CSW01_16720 and CSW01_16725 are separated by 174 nucleotides
CSW01_16725 and CSW01_16730 are separated by 68 nucleotides
CSW01_16730 and CSW01_16735 are separated by 185 nucleotides
CSW01_16715: CSW01_16715 - IS200/IS605 family transposase, at 426,516 to 426,953
_16715
CSW01_16720: CSW01_16720 - GNAT family N-acetyltransferase, at 427,017 to 427,235
_16720
CSW01_16725: CSW01_16725 - DUF3800 domain-containing protein, at 427,410 to 428,282
_16725
CSW01_16730: CSW01_16730 - glutathione S-transferase, at 428,351 to 429,031
_16730
CSW01_16735: CSW01_16735 - DUF4160 domain-containing protein, at 429,217 to 429,492
_16735
Group
Condition
CSW01
_16715
CSW01
_16720
CSW01
_16725
CSW01
_16730
CSW01
_16735
phage
ICP3_phage_0.41_MOI_rep2
N.D.
N.D.
+0.3
-0.9
-0.4
lb_aerobic
LB_Aerobic_60MIN_ZN2B
N.D.
N.D.
+0.1
-0.3
-0.7
phage
ICP1_phage_0.23_MOI_rep1
N.D.
N.D.
-0.3
-0.5
-0.0
phage
ICP1_phage_235.3_MOI_rep2
N.D.
N.D.
+0.1
-0.9
-0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
N.D.
N.D.
-0.3
-0.4
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
N.D.
N.D.
-0.4
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
N.D.
N.D.
-0.2
-0.4
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
N.D.
N.D.
-0.3
-0.2
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
N.D.
N.D.
-0.2
-0.4
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
N.D.
N.D.
-0.2
-0.2
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
N.D.
N.D.
-0.2
-0.4
-0.1
phage
ICP1_phage_2.3_MOI_rep1
N.D.
N.D.
+0.1
-0.4
-0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
N.D.
N.D.
-0.3
-0.4
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
N.D.
N.D.
-0.3
-0.3
+0.1
phage
ICP3_phage_411_MOI_rep2
N.D.
N.D.
+0.3
-0.9
+0.2
phage
ICP3_phage_41.1_MOI_rep2
N.D.
N.D.
-0.1
-0.8
+0.6
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
N.D.
N.D.
-0.1
-0.3
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
N.D.
N.D.
-0.1
-0.4
+0.3
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
N.D.
N.D.
-0.0
-0.4
+0.3
phage
ICP3_phage_41.1_MOI_rep1
N.D.
N.D.
+0.3
-0.4
+0.1
phage
ICP1_phage_2.3_MOI_rep2
N.D.
N.D.
-0.3
-0.3
+0.6
phage
ICP3_phage_0.41_MOI_rep1
N.D.
N.D.
+0.1
-0.4
+0.4
phage
ICP1_phage_23.5_MOI_rep2
N.D.
N.D.
+0.5
-0.1
-0.2
phage
ICP3_phage_411_MOI_rep1
N.D.
N.D.
+0.3
-0.5
+0.6
phage
ICP1_phage_235.3_MOI_rep1
N.D.
N.D.
-0.0
-0.4
+0.9
phage
ICP3_phage_4.1_MOI_rep2
N.D.
N.D.
-0.0
-0.1
+0.6
phage
ICP3_phage_4.1_MOI_rep1
N.D.
N.D.
-0.0
-0.1
+0.6
phage
NoPhageControl
N.D.
N.D.
+0.1
+0.0
+0.5
phage
ICP1_phage_23.5_MOI_rep1
N.D.
N.D.
-0.2
-0.2
+1.1
phage
ICP1_phage_0.23_MOI_rep2
N.D.
N.D.
+0.3
+0.1
+0.5
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