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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_16560 and CSW01_16565 overlap by 14 nucleotides
CSW01_16565 and CSW01_16570 are separated by 136 nucleotides
CSW01_16570 and CSW01_16575 are separated by 11 nucleotides
CSW01_16575 and CSW01_16580 are separated by 280 nucleotides
CSW01_16560: CSW01_16560 - toxin HigB-2, at 413,130 to 413,462
_16560
CSW01_16565: CSW01_16565 - transcriptional regulator, at 413,449 to 413,763
_16565
CSW01_16570: CSW01_16570 - N-acetyltransferase, at 413,900 to 414,334
_16570
CSW01_16575: CSW01_16575 - acetyltransferase, at 414,346 to 414,501
_16575
CSW01_16580: CSW01_16580 - IS5 family transposase ISVch5, at 414,782 to 415,762
_16580
Group
Condition
CSW01
_16560
CSW01
_16565
CSW01
_16570
CSW01
_16575
CSW01
_16580
phage
ICP1_phage_2.3_MOI_rep1
-0.6
N.D.
-0.9
+0.4
N.D.
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
N.D.
-0.5
-0.5
N.D.
phage
ICP1_phage_23.5_MOI_rep1
+0.2
N.D.
-1.0
-0.2
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
-0.0
N.D.
-0.2
-0.4
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.0
N.D.
-0.4
-0.3
N.D.
phage
ICP3_phage_0.41_MOI_rep2
-0.2
N.D.
+0.1
-0.5
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.1
N.D.
-0.3
-0.2
N.D.
phage
ICP3_phage_41.1_MOI_rep2
+0.1
N.D.
-0.7
+0.0
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.1
N.D.
-0.0
-0.4
N.D.
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.0
N.D.
-0.1
-0.5
N.D.
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.2
N.D.
-0.5
+0.1
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
-0.0
N.D.
+0.0
-0.5
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.0
N.D.
+0.0
-0.5
N.D.
phage
ICP1_phage_2.3_MOI_rep2
+0.2
N.D.
+0.1
-0.8
N.D.
phage
ICP3_phage_4.1_MOI_rep2
+0.4
N.D.
-0.1
-0.6
N.D.
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.0
N.D.
+0.0
-0.4
N.D.
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.2
N.D.
-0.2
-0.4
N.D.
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
N.D.
+0.2
-0.3
N.D.
phage
ICP1_phage_235.3_MOI_rep2
-0.3
N.D.
-0.4
+0.5
N.D.
phage
NoPhageControl
+0.1
N.D.
+0.2
-0.4
N.D.
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
N.D.
+0.3
-0.3
N.D.
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
N.D.
+0.2
-0.3
N.D.
phage
ICP1_phage_235.3_MOI_rep1
+0.4
N.D.
-0.6
+0.1
N.D.
phage
ICP3_phage_41.1_MOI_rep1
+0.1
N.D.
+0.4
-0.5
N.D.
phage
ICP1_phage_0.23_MOI_rep2
-0.5
N.D.
+0.5
+0.2
N.D.
phage
ICP1_phage_23.5_MOI_rep2
-0.0
N.D.
+0.5
+0.0
N.D.
phage
ICP3_phage_0.41_MOI_rep1
+0.1
N.D.
+0.7
-0.4
N.D.
phage
ICP3_phage_4.1_MOI_rep1
+0.4
N.D.
-0.1
+0.3
N.D.
phage
ICP3_phage_411_MOI_rep1
-0.3
N.D.
+0.3
+0.8
N.D.
phage
ICP3_phage_411_MOI_rep2
+0.0
N.D.
+0.7
+0.4
N.D.
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