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Protein
Homologs
Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_16245 and CSW01_16250 are separated by 81 nucleotides
CSW01_16250 and CSW01_16255 are separated by 35 nucleotides
CSW01_16255 and CSW01_16260 are separated by 201 nucleotides
CSW01_16260 and CSW01_16265 overlap by 4 nucleotides
CSW01_16245: CSW01_16245 - hypothetical protein, at 384,646 to 384,960
_16245
CSW01_16250: CSW01_16250 - C4-dicarboxylate ABC transporter, at 385,042 to 385,170
_16250
CSW01_16255: CSW01_16255 - hypothetical protein, at 385,206 to 385,631
_16255
CSW01_16260: CSW01_16260 - prevent-host-death family protein, at 385,833 to 386,126
_16260
CSW01_16265: CSW01_16265 - type II toxin-antitoxin system RelE/ParE family toxin, at 386,123 to 386,482
_16265
Group
Condition
CSW01
_16245
CSW01
_16250
CSW01
_16255
CSW01
_16260
CSW01
_16265
phage
ICP1_phage_23.5_MOI_rep2
-0.2
-0.4
-0.1
-0.2
-0.8
phage
ICP3_phage_411_MOI_rep1
+0.3
+0.1
-0.6
-0.3
-0.3
phage
ICP1_phage_235.3_MOI_rep2
-0.4
+0.1
-1.0
-0.1
+0.4
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
-0.2
+0.2
-0.6
-0.3
-0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-0.1
+0.3
-0.1
-0.9
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
+0.3
-0.3
-0.2
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.1
+0.1
-0.4
-0.3
-0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
-0.3
+0.2
-0.1
-0.1
-0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.2
-0.4
-0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
+0.2
-0.4
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.2
+0.1
-0.5
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.2
-0.3
-0.2
-0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.1
+0.4
-0.2
-0.1
-0.3
phage
NoPhageControl
-0.2
+0.3
-0.2
-0.1
-0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
-0.0
+0.2
-0.3
-0.2
+0.2
phage
ICP3_phage_41.1_MOI_rep1
+0.5
+0.8
-1.2
-0.0
-0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
+0.2
-0.4
-0.1
+0.4
phage
ICP3_phage_4.1_MOI_rep1
-0.0
+0.7
-0.1
+0.1
-0.4
phage
ICP1_phage_2.3_MOI_rep1
+0.4
+0.3
+0.0
-0.5
+0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.1
+0.2
-0.6
+0.3
+0.3
phage
ICP3_phage_41.1_MOI_rep2
+0.6
+0.6
-0.6
+0.1
-0.3
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.2
+0.4
-0.2
-0.2
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.0
+0.6
-0.1
-0.1
+0.3
phage
ICP1_phage_235.3_MOI_rep1
+0.1
+0.3
-0.5
-0.0
+0.9
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.3
+0.2
-0.4
+0.1
+0.5
phage
ICP3_phage_0.41_MOI_rep1
+0.4
+0.1
+0.0
-0.1
+0.4
phage
ICP1_phage_23.5_MOI_rep1
+0.3
+0.4
-0.8
+0.2
+0.8
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.3
+0.7
-0.4
+0.1
+0.4
phage
ICP3_phage_411_MOI_rep2
+0.6
+0.5
-0.2
+0.1
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.3
+0.5
+0.1
+0.1
+0.3
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