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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_15335 and CSW01_15340 are separated by 36 nucleotides
CSW01_15340 and CSW01_15345 are separated by 387 nucleotides
CSW01_15345 and CSW01_15350 are separated by 243 nucleotides
CSW01_15350 and CSW01_15355 are separated by 466 nucleotides
CSW01_15335: CSW01_15335 - glycine cleavage system protein H, at 295,447 to 295,827
_15335
CSW01_15340: CSW01_15340 - serine hydroxymethyltransferase, at 295,864 to 297,171
_15340
CSW01_15345: CSW01_15345 - XRE family transcriptional regulator, at 297,559 to 298,182
_15345
CSW01_15350: CSW01_15350 - glycine cleavage system aminomethyltransferase T, at 298,426 to 299,556
_15350
CSW01_15355: CSW01_15355 - integrase, at 300,023 to 301,180
_15355
Group
Condition
CSW01
_15335
CSW01
_15340
CSW01
_15345
CSW01
_15350
CSW01
_15355
phage
ICP3_phage_411_MOI_rep1
-0.9
-0.2
+0.3
-0.2
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.9
+0.1
-0.1
-0.3
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.7
+0.1
-0.1
-0.3
-0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.3
-0.4
+0.1
-0.3
-0.0
phage
ICP1_phage_0.23_MOI_rep1
+0.1
-0.8
-0.0
-0.2
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.6
+0.0
+0.2
-0.1
-0.0
phage
ICP3_phage_411_MOI_rep2
-0.3
-0.6
+0.4
-0.1
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
-0.5
+0.2
+0.0
-0.0
+0.0
phage
ICP1_phage_235.3_MOI_rep2
-0.2
+0.0
+0.3
-0.3
-0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.0
-0.2
+0.3
-0.1
-0.2
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.4
+0.2
+0.0
+0.2
-0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.1
-0.4
+0.3
+0.1
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.1
+0.3
-0.1
+0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.1
-0.3
+0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
+0.3
+0.0
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.3
+0.2
-0.0
+0.1
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.2
+0.3
-0.2
+0.1
-0.0
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
+0.2
-0.1
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.2
-0.2
+0.3
-0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
-0.1
+0.1
-0.0
+0.3
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
-0.2
+0.4
-0.1
+0.3
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.2
+0.2
-0.2
+0.1
+0.0
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
-0.1
+0.3
+0.1
+0.3
-0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
+0.3
-0.0
+0.3
+0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
+0.4
-0.0
+0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
+0.2
+0.0
+0.3
+0.0
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.3
+0.3
-0.2
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
+0.2
-0.0
+0.2
-0.0
phage
ICP1_phage_23.5_MOI_rep2
+0.4
-0.3
+0.1
+0.2
+0.2
phage
ICP3_phage_0.41_MOI_rep2
-0.0
+0.1
+0.5
+0.1
+0.3
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