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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_15210 and CSW01_15215 are separated by 99 nucleotides
CSW01_15215 and CSW01_15220 are separated by 172 nucleotides
CSW01_15220 and CSW01_15225 are separated by 332 nucleotides
CSW01_15225 and CSW01_15230 are separated by 183 nucleotides
CSW01_15210: CSW01_15210 - L-ascorbate 6-phosphate lactonase, at 268,323 to 269,390
_15210
CSW01_15215: CSW01_15215 - cytochrome b, at 269,490 to 270,023
_15215
CSW01_15220: CSW01_15220 - alpha-amylase, at 270,196 to 271,596
_15220
CSW01_15225: CSW01_15225 - antibiotic acetyltransferase, at 271,929 to 272,627
_15225
CSW01_15230: CSW01_15230 - glycosyl hydrolase, at 272,811 to 274,977
_15230
Group
Condition
CSW01
_15210
CSW01
_15215
CSW01
_15220
CSW01
_15225
CSW01
_15230
phage
ICP3_phage_411_MOI_rep2
+0.2
-0.5
-0.4
-0.6
+0.0
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.1
-0.2
-0.5
-0.1
phage
ICP1_phage_2.3_MOI_rep2
-0.2
+0.3
-0.1
-0.7
+0.1
phage
ICP3_phage_41.1_MOI_rep2
-0.4
-0.1
-0.2
-0.1
+0.1
phage
ICP1_phage_23.5_MOI_rep1
+0.1
-0.2
-0.0
-0.3
-0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.0
-0.4
-0.1
+0.1
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.2
-0.4
-0.2
+0.0
-0.0
phage
ICP1_phage_0.23_MOI_rep2
+0.0
+0.4
-0.1
-0.8
+0.2
phage
ICP3_phage_411_MOI_rep1
+0.1
-0.0
+0.2
-0.8
+0.2
phage
ICP3_phage_0.41_MOI_rep1
+0.4
-0.0
+0.0
-0.7
+0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.2
-0.2
+0.1
-0.1
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.4
-0.3
-0.0
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16B
+0.3
-0.1
-0.1
+0.1
-0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.4
-0.4
-0.0
+0.1
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.4
-0.1
+0.0
-0.3
+0.1
phage
ICP1_phage_235.3_MOI_rep1
-0.6
+0.6
-0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
+0.4
-0.1
-0.1
+0.1
-0.1
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.3
-0.4
+0.2
+0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep1
-0.1
+0.4
-0.1
-0.0
+0.1
phage
ICP3_phage_4.1_MOI_rep2
-0.0
+0.2
+0.3
-0.2
+0.2
lb_aerobic
LB_Aerobic_18HR_ZN18A
+0.5
-0.2
+0.1
+0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.3
-0.1
+0.1
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.4
+0.1
-0.0
+0.0
+0.1
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.4
-0.2
+0.1
+0.2
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.3
-0.0
+0.2
+0.2
+0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.4
-0.0
+0.1
+0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.5
+0.0
+0.1
-0.0
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.1
+0.4
+0.0
+0.2
+0.1
phage
ICP1_phage_23.5_MOI_rep2
+0.2
+0.5
+0.2
+0.0
+0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.7
-0.0
+0.1
+0.3
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