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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_15175 and CSW01_15180 are separated by 11 nucleotides
CSW01_15180 and CSW01_15185 are separated by 5 nucleotides
CSW01_15185 and CSW01_15190 are separated by 5 nucleotides
CSW01_15190 and CSW01_15195 are separated by 8 nucleotides
CSW01_15175: CSW01_15175 - xylulose 5-phosphate 3-epimerase, at 261,634 to 262,518
_15175
CSW01_15180: CSW01_15180 - 3-keto-L-gulonate-6-phosphate decarboxylase, at 262,530 to 263,177
_15180
CSW01_15185: CSW01_15185 - Cof-type HAD-IIB family hydrolase, at 263,183 to 264,004
_15185
CSW01_15190: CSW01_15190 - L-ribulose-5-phosphate 4-epimerase, at 264,010 to 264,702
_15190
CSW01_15195: CSW01_15195 - PTS ascorbate-specific transporter subunit IIA, at 264,711 to 265,217
_15195
Group
Condition
CSW01
_15175
CSW01
_15180
CSW01
_15185
CSW01
_15190
CSW01
_15195
phage
ICP1_phage_23.5_MOI_rep2
-0.1
-1.5
-0.1
-0.6
-0.2
phage
ICP1_phage_2.3_MOI_rep2
-0.1
-1.9
-0.1
-0.1
+0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.5
-1.3
-0.3
-0.1
+0.2
phage
ICP3_phage_411_MOI_rep2
-0.3
-1.2
+0.2
-0.2
-0.3
phage
ICP1_phage_2.3_MOI_rep1
-0.2
-0.3
-0.5
+0.1
-0.7
phage
ICP3_phage_41.1_MOI_rep1
-0.2
-0.9
-0.3
+0.2
-0.3
phage
ICP1_phage_0.23_MOI_rep1
-1.1
-0.0
-0.2
+0.0
-0.1
phage
ICP3_phage_0.41_MOI_rep1
+0.1
-0.6
-0.0
+0.1
-0.7
phage
ICP1_phage_23.5_MOI_rep1
-0.4
-0.4
-0.4
+0.2
+0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.2
-0.0
-0.3
-0.4
-0.3
phage
ICP1_phage_235.3_MOI_rep2
-0.1
-0.6
-0.2
-0.0
+0.1
lb_aerobic
LB_Aerobic_120MIN_ZN10B
-0.0
-0.5
-0.1
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
-0.3
-0.1
-0.2
+0.0
phage
ICP3_phage_411_MOI_rep1
-0.4
+0.4
-0.3
-0.1
-0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
+0.2
-0.7
-0.2
+0.0
+0.1
phage
ICP1_phage_0.23_MOI_rep2
-0.5
+0.3
-0.1
-0.1
+0.1
phage
ICP3_phage_4.1_MOI_rep2
+0.4
-0.5
-0.1
+0.3
-0.4
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.3
-0.1
-0.2
-0.2
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
+0.1
-0.3
-0.1
+0.0
+0.2
phage
ICP3_phage_0.41_MOI_rep2
+0.2
-0.3
-0.2
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.4
-0.2
+0.0
-0.2
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.3
-0.4
+0.1
-0.0
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17A
+0.2
-0.3
-0.1
-0.0
+0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
+0.3
-0.2
-0.1
-0.1
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
+0.0
+0.4
-0.2
-0.3
+0.3
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.3
+0.3
-0.1
-0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.4
+0.0
-0.5
+0.1
+0.5
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.4
+0.6
-0.1
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.1
+0.3
-0.1
-0.1
+0.3
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.2
+0.4
+0.0
+0.1
+0.1
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