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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_14575 and CSW01_14580 are separated by 2 nucleotides
CSW01_14580 and CSW01_14585 are separated by 6 nucleotides
CSW01_14585 and CSW01_14590 are separated by 2 nucleotides
CSW01_14590 and CSW01_14595 are separated by 25 nucleotides
CSW01_14575: CSW01_14575 - type VI secretion system-associated FHA domain protein TagH, at 122,067 to 123,554
_14575
CSW01_14580: CSW01_14580 - type VI secretion system lipoprotein TssJ, at 123,557 to 124,033
_14580
CSW01_14585: CSW01_14585 - type VI secretion system baseplate subunit TssK, at 124,040 to 125,374
_14585
CSW01_14590: CSW01_14590 - type IV secretion protein DotU, at 125,377 to 126,150
_14590
CSW01_14595: CSW01_14595 - type VI secretion system ATPase TssH, at 126,176 to 128,785
_14595
Group
Condition
CSW01
_14575
CSW01
_14580
CSW01
_14585
CSW01
_14590
CSW01
_14595
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.1
-0.1
-0.2
-0.1
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.0
-0.4
-0.4
+0.1
+0.2
phage
ICP1_phage_235.3_MOI_rep1
+0.0
-0.2
-0.2
-0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.1
-0.3
+0.0
-0.1
+0.1
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.0
-0.1
-0.1
-0.1
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14B
-0.1
-0.2
+0.0
-0.1
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.0
-0.2
+0.0
-0.2
+0.0
phage
ICP3_phage_4.1_MOI_rep1
+0.0
-0.2
-0.0
-0.3
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.2
-0.2
-0.1
-0.1
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.0
-0.2
-0.0
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15A
+0.1
-0.1
+0.1
-0.1
+0.1
phage
ICP1_phage_0.23_MOI_rep1
+0.2
+0.1
-0.2
-0.2
+0.0
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
+0.1
-0.1
-0.0
+0.1
+0.1
phage
ICP3_phage_411_MOI_rep1
+0.3
-0.2
+0.1
-0.2
+0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.1
+0.2
-0.0
-0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.0
-0.1
-0.1
+0.2
+0.1
lb_aerobic
LB_Aerobic_18HR_ZN18A
-0.0
-0.0
+0.1
-0.1
+0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
+0.1
+0.0
+0.1
-0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep2
+0.3
+0.1
-0.0
-0.1
-0.0
phage
ICP1_phage_23.5_MOI_rep2
+0.0
+0.0
+0.1
-0.2
+0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.4
-0.4
-0.1
-0.0
+0.4
phage
ICP1_phage_23.5_MOI_rep1
+0.2
-0.2
+0.1
+0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.2
+0.0
+0.1
+0.0
+0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.2
-0.4
+0.2
+0.2
+0.1
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
+0.1
+0.1
-0.0
-0.1
+0.2
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.2
-0.1
+0.0
+0.2
phage
ICP3_phage_0.41_MOI_rep1
+0.2
-0.0
+0.1
+0.1
+0.2
lb_aerobic_phage
LB_Aerobic_PHAGE INFX20MPI_ZN6A
+0.1
+0.1
+0.0
+0.1
+0.2
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.0
+0.2
+0.1
+0.2
phage
ICP3_phage_4.1_MOI_rep2
+0.4
+0.2
+0.2
+0.0
+0.2
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