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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_14555 and CSW01_14560 are separated by 2 nucleotides
CSW01_14560 and CSW01_14565 are separated by 5 nucleotides
CSW01_14565 and CSW01_14570 overlap by 37 nucleotides
CSW01_14570 and CSW01_14575 are separated by 2 nucleotides
CSW01_14555: CSW01_14555 - type VI secretion system contractile sheath large subunit, at 117,391 to 118,869
_14555
CSW01_14560: CSW01_14560 - type VI secretion system baseplate subunit TssE, at 118,872 to 119,309
_14560
CSW01_14565: CSW01_14565 - type VI secretion system baseplate subunit TssF, at 119,315 to 121,084
_14565
CSW01_14570: CSW01_14570 - type VI secretion system baseplate subunit TssG, at 121,048 to 122,064
_14570
CSW01_14575: CSW01_14575 - type VI secretion system-associated FHA domain protein TagH, at 122,067 to 123,554
_14575
Group
Condition
CSW01
_14555
CSW01
_14560
CSW01
_14565
CSW01
_14570
CSW01
_14575
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
-0.2
-0.2
+0.0
-0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
-0.2
-0.1
+0.1
+0.0
-0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_60MIN_ZN5A
-0.2
+0.1
+0.1
-0.0
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11A
-0.2
-0.1
+0.2
+0.2
-0.1
phage
ICP1_phage_0.23_MOI_rep1
-0.2
+0.2
-0.1
-0.2
+0.2
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.0
-0.3
+0.1
+0.2
+0.0
phage
ICP1_phage_2.3_MOI_rep2
+0.1
+0.2
-0.3
-0.1
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
-0.1
+0.1
+0.0
-0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep1
+0.3
-0.1
+0.0
-0.1
+0.0
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.1
-0.1
+0.0
+0.2
+0.1
lb_aerobic
LB_Aerobic_180MIN_ZN14A
-0.2
+0.0
+0.2
+0.1
-0.0
phage
ICP1_phage_2.3_MOI_rep1
+0.2
-0.1
+0.2
-0.0
+0.0
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
+0.1
-0.1
+0.1
+0.1
+0.0
lb_aerobic
LB_Aerobic_180MIN_ZN14B
+0.1
-0.0
+0.1
+0.2
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
+0.2
+0.2
-0.0
+0.1
-0.1
phage
ICP1_phage_0.23_MOI_rep2
+0.2
-0.1
-0.1
+0.2
+0.2
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
+0.1
+0.0
+0.1
-0.1
+0.2
phage
NoPhageControl
+0.1
+0.1
+0.1
+0.1
+0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.0
+0.2
+0.1
+0.1
+0.2
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_180MIN_ZN17B
+0.0
+0.1
+0.2
+0.1
+0.1
phage
ICP1_phage_235.3_MOI_rep2
+0.3
+0.1
+0.4
-0.0
-0.1
phage
ICP3_phage_4.1_MOI_rep1
+0.1
+0.3
-0.0
+0.2
+0.0
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13A
+0.0
+0.2
+0.2
+0.1
+0.2
phage
ICP3_phage_41.1_MOI_rep2
+0.3
+0.4
+0.0
-0.2
+0.3
phage
ICP3_phage_411_MOI_rep2
+0.1
+0.6
-0.0
+0.0
+0.1
phage
ICP3_phage_0.41_MOI_rep2
+0.1
+0.4
+0.4
+0.2
+0.0
phage
ICP1_phage_23.5_MOI_rep1
+0.4
+0.3
+0.1
+0.0
+0.2
phage
ICP3_phage_411_MOI_rep1
+0.4
+0.2
+0.1
-0.1
+0.3
phage
ICP3_phage_41.1_MOI_rep1
+0.3
+0.2
+0.2
+0.2
+0.4
phage
ICP3_phage_4.1_MOI_rep2
+0.5
+0.3
-0.0
+0.2
+0.4
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