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Protein
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Fitness for 5 genes in
Vibrio cholerae E7946 ATCC 55056
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
CSW01_14530 and CSW01_14535 are separated by 41 nucleotides
CSW01_14535 and CSW01_14540 are separated by 771 nucleotides
CSW01_14540 and CSW01_14545 overlap by 17 nucleotides
CSW01_14545 and CSW01_14550 are separated by 431 nucleotides
CSW01_14530: CSW01_14530 - SulP family inorganic anion transporter, at 110,869 to 112,647
_14530
CSW01_14535: CSW01_14535 - RluA family pseudouridine synthase, at 112,689 to 114,368
_14535
CSW01_14540: CSW01_14540 - hypothetical protein, at 115,140 to 115,424
_14540
CSW01_14545: CSW01_14545 - sel1 repeat family protein, at 115,408 to 116,412
_14545
CSW01_14550: CSW01_14550 - type VI secretion system contractile sheath small subunit, at 116,844 to 117,350
_14550
Group
Condition
CSW01
_14530
CSW01
_14535
CSW01
_14540
CSW01
_14545
CSW01
_14550
phage
ICP3_phage_0.41_MOI_rep2
-0.1
+0.0
-1.7
-0.2
+0.0
phage
ICP3_phage_4.1_MOI_rep1
-0.3
-0.0
-0.9
-0.1
-0.3
phage
ICP3_phage_411_MOI_rep1
-0.4
-0.4
-0.7
-0.2
-0.0
phage
ICP1_phage_0.23_MOI_rep2
-0.5
-0.4
-0.9
-0.0
+0.1
phage
ICP1_phage_2.3_MOI_rep1
-0.5
-0.4
-0.6
-0.1
+0.1
phage
ICP3_phage_41.1_MOI_rep1
-0.5
+0.1
-0.4
-0.0
-0.4
phage
ICP3_phage_4.1_MOI_rep2
-0.6
-0.3
-0.4
+0.0
+0.0
phage
ICP1_phage_2.3_MOI_rep2
-0.3
-0.4
-0.1
+0.1
-0.2
phage
ICP3_phage_411_MOI_rep2
-0.6
-0.0
-0.6
-0.1
+0.5
phage
ICP1_phage_235.3_MOI_rep1
-0.4
-0.1
-0.2
-0.0
-0.1
lb_anaerobic
LB_Anaerobic_60MIN_ZN4B
-0.1
-0.1
-0.1
-0.1
-0.3
phage
ICP3_phage_41.1_MOI_rep2
-0.4
-0.5
+0.1
-0.1
+0.2
phage
ICP1_phage_0.23_MOI_rep1
-0.5
-0.1
-0.3
+0.0
+0.3
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_18HR_ZN21A
-0.2
-0.2
-0.1
-0.1
-0.1
lb_anaerobic
LB_Anaerobic_180MIN_ZN16A
-0.1
-0.1
+0.0
-0.2
-0.3
phage
ICP1_phage_23.5_MOI_rep2
-0.3
-0.1
-0.0
-0.1
+0.0
lb_aerobic
LB_Aerobic_120MIN_ZN10B
+0.1
-0.0
-0.1
-0.1
-0.4
lb_0.5%bileacids_anaerobic
LB_0.5%bileacids_Anaerobic_120MIN_ZN13B
-0.2
+0.1
+0.0
-0.1
-0.2
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19B
+0.3
-0.0
-0.1
-0.2
-0.2
lb_anaerobic
LB_Anaerobic_18HR_ZN20A
+0.2
-0.0
-0.4
-0.0
+0.0
phage
ICP1_phage_23.5_MOI_rep1
-0.5
-0.1
+0.6
+0.0
-0.1
lb_aerobic
LB_Aerobic_60MIN_ZN2B
-0.2
-0.1
+0.1
-0.0
+0.2
lb_anaerobic
LB_Anaerobic_120MIN_ZN12B
-0.1
+0.1
+0.3
-0.1
-0.3
lb_anaerobic
LB_Anaerobic_18HR_ZN20B
-0.2
-0.0
+0.3
-0.1
-0.0
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_18HR_ZN19A
+0.7
-0.2
-0.1
-0.2
-0.3
lb_anaerobic
LB_Anaerobic_120MIN_ZN12A
-0.2
+0.1
+0.2
-0.0
-0.1
phage
ICP3_phage_0.41_MOI_rep1
-0.2
-0.1
+0.2
-0.0
+0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_120MIN_ZN11B
+0.1
+0.0
+0.2
-0.1
-0.1
lb_0.5%bileacids_aerobic
LB_0.5%bileacids_aerobic_180MIN_ZN15B
+0.0
-0.1
+0.3
-0.0
-0.2
lb_aerobic
LB_Aerobic_18HR_ZN18B
+0.6
-0.1
+0.1
-0.1
-0.1
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